Study : jhp_0363 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C6_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C6_S1
Complex: CIT_B_2(1WDI) / Model_3(1WDI/A) = [4.0] Download506.3621.45MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGNTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLKDFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQEVLCIGTTALRSVEYFKRLKNPNQESFECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL
Complex: CIT_B_2(1WDI) / Model_24(1WDI/A) = [4.0] Download494.5021.45MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGNTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLKDFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQEVLCIGTTALRSVEYFKRLKNPNQESFECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL
Complex: UNL_A_3(1VKY) / Model_36(1VKY/A) = [4.1] Download372.389.93MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGNTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLKDFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQEVLCIGTTALRSVEYFKRLKNPNQESFECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL
Complex: UNL_B_4(1VKY) / Model_21(1VKY/B) = [4.1] Download383.886.44MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGNTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLKDFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQEVLCIGTTALRSVEYFKRLKNPNQESFECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL
Complex: UNL_A_3(1VKY) / Model_23(1VKY/A) = [4.1] Download434.839.93MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGNTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLKDFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQEVLCIGTTALRSVEYFKRLKNPNQESFECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL
Consensus
[pKd Mean = 4.06]
-438
(s=54)
13
(s=6)
MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQTITHTTFEHVLDFFPKNALVVLNDTKVIKARLFGSKHAFLPSKTTEVFFHRFFKGNTALTQIKGKIKVGDKIFFDANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYIKRADESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLLKDFKHAFLTLHVGAGTFLSVETKDIREHQIHTEVLHIPKKSQEILQESQEVLCIGTTALRSVEYFKRLKNPNQESFECDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL