@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0412: (2015-12-15 )
MLYSLVKKYLFSLDAEIAHEKVCQILRTLSSSPFLCRLIHSQWGYKNPKLENEILGLNFPNPLGLAAGFDKNASMLRALIAFGFGYLEAGTLTNIAQSGNEKPRLFRHIEEESLQNAMGFNNYGAILGVRAFNRFAPYKTPIGINLGKNKHIEQAHALEDYQAVLNQCLNIGDYYTFNLSSPNTPNLRDLQNKVFVNELFCMAKEMTHKPLFLKIAPDLEIDSMLEVVNSAIEAGANGIIATNTTIDKSLVFAPKEMGGLSGKCLTKKSREIFKELAKAFFNKSVLVSVGGISDAKEAYERIKMGASLLQIYSAFIYKGPNLCQNILKDLVKLLQKDGFLSVKEAIGADLR

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_4(2BXV)
PYRD_HUMAN
[Raw transfer]



FMN_A_7(2FPT)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4JGD)
PYRD_HUMAN
[Raw transfer]



FMN_A_4(1TV5)
PYRD_PLAF7
[Raw transfer]



FMN_A_2(2WV8)
PYRD_HUMAN
[Raw transfer]



FMN_A_4(1TV5)
PYRD_PLAF7
[Raw transfer]



FMN_H_8(2FPY)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4LS1)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(2PRH)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4LS2)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3G0U)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4OQV)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3I6R)
PYRD_PLAF7
[Raw transfer]



FMN_A_8(2FPV)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(4CQ8)
PYRD_PLAF7
[Raw transfer]



FMN_C_3(2B0M)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3KVM)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4JTS)
PYRD_HUMAN
[Raw transfer]



FMN_B_6(4CQ8)
PYRD_PLAF7
[Raw transfer]



FMN_A_5(2PRL)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(3FJL)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(4ORM)
PYRD_PLAF7
[Raw transfer]



FMN_A_5(1D3H)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3KVJ)
PYRD_HUMAN
[Raw transfer]



FMN_B_6(4CQ9)
PYRD_PLAF7
[Raw transfer]



FMN_A_2(3ZWT)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(1UUO)
PYRD_RAT
[Raw transfer]



FMN_A_3(3KVK)
PYRD_HUMAN
[Raw transfer]



FMN_A_10(3W7R)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(4CQ9)
PYRD_PLAF7
[Raw transfer]



FMN_A_2(3ZWS)
PYRD_HUMAN
[Raw transfer]



FMN_A_5(1D3G)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3FJ6)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3KVL)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4LS0)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(3G0X)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4ORI)
PYRD_RAT
[Raw transfer]



FMN_A_7(2FQI)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(4JTU)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3SFK)
PYRD_PLAF7
[Raw transfer]



FMN_A_3(3I65)
PYRD_PLAF7
[Raw transfer]



FMN_A_2(3U2O)
PYRD_HUMAN
[Raw transfer]



FMN_A_2(2PRM)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3I68)
PYRD_PLAF7
[Raw transfer]



FMN_A_2(3F1Q)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(1UUM)
PYRD_RAT
[Raw transfer]



FMN_A_2(4JS3)
PYRD_HUMAN
[Raw transfer]



FMN_B_7(1UUM)
PYRD_RAT
[Raw transfer]



FMN_A_2(4JTT)
PYRD_HUMAN
[Raw transfer]



FMN_B_6(4CQA)
PYRD_PLAF7
[Raw transfer]



FMN_A_3(4CQA)
PYRD_PLAF7
[Raw transfer]



FMN_A_5(1D3G)
PYRD_HUMAN
[Raw transfer]



FMN_A_3(3O8A)
PYRD_PLAF7
[Raw transfer]



AFI_A_5(1UUM)
PYRD_RAT
[Raw transfer]



AFI_B_9(1UUM)
PYRD_RAT
[Raw transfer]



DOR_A_4(3KVK)
PYRD_HUMAN
[Raw transfer]



DOR_A_4(3KVJ)
PYRD_HUMAN
[Raw transfer]



2V6_A_4(4OQV)
PYRD_HUMAN
[Raw transfer]



2V6_A_4(4ORI)
PYRD_RAT
[Raw transfer]
55 HHSearch 91.6542% -75 - C4 -1F76 - PYRD_ECOLI -
1 PsiBlast_PDB 89.8741% -76 - C4 -1F76 - PYRD_ECOLI -
54 HHSearch 86.3233% -77 * C4 *1TV5 8.8 PYRD_PLAF7
27 PsiBlast_CBE 82.5036% -65 - C4 -4JTS 10.7 PYRD_HUMAN
14 PsiBlast_PDB 81.7536% -62 - C4 -3G0U 10.4 PYRD_HUMAN
25 PsiBlast_CBE 81.5836% -65 - C4 -4JTU 11.0 PYRD_HUMAN
37 PsiBlast_CBE 81.5636% -62 - C4 -2FPY 10.1 PYRD_HUMAN
35 PsiBlast_CBE 81.5636% -64 - C4 -3U2O 10.3 PYRD_HUMAN
26 PsiBlast_CBE 81.5636% -64 - C4 -4JTT 10.6 PYRD_HUMAN
77 Fugue 81.2734% -70 - C4 -1D3G 10.8 PYRD_HUMAN
24 PsiBlast_CBE 81.1636% -65 - C4 -4LS0 10.1 PYRD_HUMAN
30 PsiBlast_CBE 81.1136% -64 - C4 -3W7R 10.8 PYRD_HUMAN
36 PsiBlast_CBE 81.0836% -63 - C4 -2FQI 10.1 PYRD_HUMAN
23 PsiBlast_CBE 80.9736% -64 - C4 -4LS1 10.2 PYRD_HUMAN
20 PsiBlast_PDB 80.9436% -66 - C4 -3KVK 10.1 PYRD_HUMAN
13 PsiBlast_PDB 80.8936% -63 - C4 -3FJL 10.7 PYRD_HUMAN
15 PsiBlast_PDB 80.8336% -65 - C4 -3G0X 10.0 PYRD_HUMAN
17 PsiBlast_PDB 80.7736% -62 - C4 -3ZWT 10.9 PYRD_HUMAN
19 PsiBlast_PDB 80.7536% -65 - C4 -3KVJ 10.9 PYRD_HUMAN
38 PsiBlast_CBE 80.7436% -61 - C4 -2FPV 10.0 PYRD_HUMAN
39 PsiBlast_CBE 80.5436% -61 - C4 -2FPT 9.9 PYRD_HUMAN
9 PsiBlast_PDB 80.4636% -62 - C4 -2PRL 10.9 PYRD_HUMAN
11 PsiBlast_PDB 80.3636% -61 - C4 -3F1Q 10.8 PYRD_HUMAN
16 PsiBlast_PDB 80.3536% -62 - C4 -3ZWS 10.6 PYRD_HUMAN
33 PsiBlast_CBE 80.3436% -60 - C4 -2B0M 9.4 PYRD_HUMAN
22 PsiBlast_CBE 80.2736% -63 - C4 -4LS2 10.5 PYRD_HUMAN
28 PsiBlast_CBE 80.1936% -62 - C4 -4JS3 10.9 PYRD_HUMAN
32 PsiBlast_CBE 79.8836% -62 - C4 -3KVL 10.6 PYRD_HUMAN
5 PsiBlast_PDB 79.8636% -66 - C4 -1D3G 10.9 PYRD_HUMAN
31 PsiBlast_CBE 79.7436% -65 - C4 -3KVM 10.8 PYRD_HUMAN
18 PsiBlast_PDB 79.6936% -72 - C4 -4OQV 11.0 PYRD_HUMAN
12 PsiBlast_PDB 79.6336% -62 - C4 -3FJ6 10.4 PYRD_HUMAN
29 PsiBlast_CBE 79.5736% -63 - C4 -4JGD 10.6 PYRD_HUMAN
7 PsiBlast_PDB 79.5736% -63 - C4 -2BXV 10.1 PYRD_HUMAN
2 PsiBlast_PDB 79.4938% -74 - C4 -1UUM 9.3 PYRD_RAT
6 PsiBlast_PDB 79.2736% -62 - C4 -1D3H 9.9 PYRD_HUMAN
34 PsiBlast_CBE 79.1336% -59 - C4 -2WV8 9.4 PYRD_HUMAN
21 PsiBlast_CBE 79.0938% -74 - C4 -1UUM 9.2 PYRD_RAT
3 PsiBlast_PDB 79.0238% -70 - C4 -1UUO 8.8 PYRD_RAT
53 PsiBlast_CBE 78.8331% -71 - C4 -1TV5 8.8 PYRD_PLAF7
8 PsiBlast_PDB 78.6836% -69 - C4 -2PRH 10.6 PYRD_HUMAN
10 PsiBlast_PDB 77.8136% -61 - C4 -2PRM 9.7 PYRD_HUMAN
4 PsiBlast_PDB 76.9738% -66 - C4 -4ORI 9.8 PYRD_RAT
50 PsiBlast_CBE 74.8733% -72 - C4 -4CQ9 10.0 PYRD_PLAF7
40 PsiBlast_CBE 74.4633% -77 - C4 -3SFK 7.9 PYRD_PLAF7
49 PsiBlast_CBE 73.2333% -70 - C4 -4CQ9 9.8 PYRD_PLAF7
47 PsiBlast_CBE 73.0633% -71 - C4 -4CQA 10.3 PYRD_PLAF7
42 PsiBlast_CBE 72.9233% -67 - C4 -3O8A 9.1 PYRD_PLAF7
52 PsiBlast_CBE 72.3333% -70 - C4 -4CQ8 10.1 PYRD_PLAF7
51 PsiBlast_CBE 72.2133% -67 - C4 -4CQ8 9.5 PYRD_PLAF7
48 PsiBlast_CBE 72.0733% -71 - C4 -4CQA 10.0 PYRD_PLAF7
45 PsiBlast_CBE 71.7133% -72 - C4 -3I65 10.2 PYRD_PLAF7
46 PsiBlast_CBE 71.2033% -68 - C4 -4ORM 10.0 PYRD_PLAF7
43 PsiBlast_CBE 70.0833% -64 - C4 -3I6R 9.3 PYRD_PLAF7
44 PsiBlast_CBE 69.6233% -64 - C4 -3I68 9.8 PYRD_PLAF7