@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0458: (2015-12-15 )
MLRLLIGLLLMSFISLQSASWQEPLRVSIEFVDLPKKIIRFPAHDLKVGEFGFVVTKLSDYEIVNSEVVIIAVENGVATAKFKAFESMKQSHLPTPRMVAKKGDLVYFRQFNNQAFLIAPNDELYEQIRATNTDINFISSDLLVTFLNGFDPKIANLRKACNVYSVGVIYIVTTNTLNILSCESFEILEKRELDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSQSKNYFAYYDALVKKEKRKEVRIEKKEERIDARENKREIKQEAIKEPKKANQGTENAPTLEEKNYQKAERKFDAKEERRRSRDERKKTKATKKAMEFEEREKEHDERDEKETEERRKALEMDKGNEKVNAKENEREINQESANEPSSENNATLKDTENTSVLKESAAKKEAPKPSSKEEKRRLKEEKKKAKAEQRAREFEQRAREHQERDEKELEERRKALEMNKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DIO_D_15(1Y66)
?
[Raw transfer]




13 PsiBlast_PDB 70.5824% 96 - C4 -4F61 - ? -
27 Fugue 67.6515% 4 - C4 -2DFS - MYO5A_CHICK -
31 Fugue 58.6615% 74 - C4 -4GKW - SAS6_CAEEL -
4 PsiBlast_PDB 52.6224% 119 - C2 -4H0X - ? -
9 PsiBlast_PDB 52.5724% 128 - C2 -1GIQ - ? -
8 PsiBlast_PDB 52.4424% 122 - C2 -4H0T - ? -
7 PsiBlast_PDB 52.1424% 120 - C2 -4H03 - ? -
3 PsiBlast_PDB 52.1424% 121 * C2 *4H0V - ? -
6 PsiBlast_PDB 51.7624% 126 - C2 -4GY2 - ? -
5 PsiBlast_PDB 51.7624% 122 - C2 -4H0Y - ? -
10 PsiBlast_PDB 51.6224% 123 - C2 -1GIR - ? -
11 PsiBlast_PDB 50.4124% 125 - C2 -3BUZ - ? -
12 PsiBlast_PDB 43.3519% 112 - C4 -2I1K - ? -
32 Fugue 41.7510% 80 - C4 -4CPC - SYCP3_HUMAN -
16 PsiBlast_PDB 41.2826% 115 - C4 -1CII - CEIA_ECOLX -
21 HHSearch 41.1915% -82 - C1 -3HRG - ? -
35 Fugue 35.4222% 154 - C4 -1W9R - ? -
14 PsiBlast_PDB 34.6423% 109 - C4 -3M3W - PACN3_MOUSE -
15 PsiBlast_PDB 34.1023% 101 - C4 -3QE6 - PACN3_MOUSE -
30 Fugue 33.9227% 161 - C4 -4C7N - -