@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0496: (2015-12-15 )
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DGL_B_4(2JFY)
MURI_HELPJ
[Raw transfer]




DGL_A_3(2JFY)
MURI_HELPJ
[Raw transfer]




DGL_A_4(4B1F)
MURI_HELPJ
[Raw transfer]




DGL_B_5(4B1F)
MURI_HELPJ
[Raw transfer]




DGL_A_4(2JFZ)
MURI_HELPJ
[Raw transfer]




DGL_A_4(2JFZ)
MURI_HELPJ
[Raw transfer]




DGL_A_4(2VVT)
MURI_ENTFA
[Raw transfer]




DGL_B_6(2VVT)
MURI_ENTFA
[Raw transfer]




DGL_A_4(2VVT)
MURI_ENTFA
[Raw transfer]




GLU_A_3(2JFO)
MURI_ENTFA
[Raw transfer]




DGL_B_4(2JFQ)
MURI_STAAR
[Raw transfer]




DGL_E_5(1ZUW)
MURI1_BACSU
[Raw transfer]




DGL_E_5(1ZUW)
MURI1_BACSU
[Raw transfer]




DGL_A_3(2JFQ)
MURI_STAAR
[Raw transfer]




DGL_H_8(1ZUW)
MURI1_BACSU
[Raw transfer]




DGL_F_6(1ZUW)
MURI1_BACSU
[Raw transfer]




GLU_A_2(2JFN)
MURI_ECOLI
[Raw transfer]




DGL_B_4(2JFO)
MURI_ENTFA
[Raw transfer]




DGL_A_3(3UHF)
MURI_CAMJE
[Raw transfer]




DGL_B_8(3UHO)
MURI_CAMJE
[Raw transfer]




DGL_A_3(3UHF)
MURI_CAMJE
[Raw transfer]




DGL_A_3(3UHO)
MURI_CAMJE
[Raw transfer]




DGL_B_8(3UHF)
MURI_CAMJE
[Raw transfer]




DGL_A_3(2JFP)
MURI_ENTFA
[Raw transfer]




DGL_A_9(2DWU)
?
[Raw transfer]




DGL_B_5(2JFP)
MURI_ENTFA
[Raw transfer]




DGL_A_9(2DWU)
?
[Raw transfer]




DGL_B_8(2DWU)
?
[Raw transfer]




DGL_C_7(2DWU)
?
[Raw transfer]




DGL_A_4(3OUT)
?
[Raw transfer]




TLA_A_2(2JFW)
?
[Raw transfer]




SIN_A_3(3IST)
MURI_LISMO
[Raw transfer]




FLC_A_3(2JFV)
?
[Raw transfer]




FLC_A_3(2JFV)
?
[Raw transfer]




DGN_C_3(1B74)
MURI_AQUPY
[Raw transfer]




DGN_C_3(1B74)
MURI_AQUPY
[Raw transfer]




VGA_B_7(2W4I)
MURI_HELPJ
[Raw transfer]




VGA_E_9(2W4I)
MURI_HELPJ
[Raw transfer]




VGA_B_7(2W4I)
MURI_HELPJ
[Raw transfer]




VGA_E_9(2W4I)
MURI_HELPJ
[Raw transfer]




5 PsiBlast_PDB 98.00100%-158 - C4 -4B1F 4.4 MURI_HELPJ
21 PsiBlast_CBE 97.98100%-158 - C4 -4B1F 4.4 MURI_HELPJ
59 HHSearch 97.54100%-157 - C4 -2JFZ 4.4 MURI_HELPJ
2 PsiBlast_PDB 97.54100%-157 - C4 -2JFZ 4.4 MURI_HELPJ
26 PsiBlast_CBE 97.04100%-153 - C4 -2JFY 4.8 MURI_HELPJ
24 PsiBlast_CBE 96.60100%-153 - C4 -2W4I 5.4 MURI_HELPJ
23 PsiBlast_CBE 96.36100%-156 - C4 -2W4I 4.9 MURI_HELPJ
3 PsiBlast_PDB 96.06100%-153 - C4 -2JFY 4.7 MURI_HELPJ
22 PsiBlast_CBE 95.77100%-152 - C4 -2W4I 5.2 MURI_HELPJ
4 PsiBlast_PDB 95.37100%-151 - C4 -2W4I 5.0 MURI_HELPJ
27 PsiBlast_CBE 94.65100%-154 - C- -2JFX - MURI_HELPJ -
6 PsiBlast_PDB 84.9253%-150 - C4 -3UHF 4.6 MURI_CAMJE
7 PsiBlast_PDB 84.4253%-149 - C4 -3UHO 4.5 MURI_CAMJE
29 PsiBlast_CBE 84.2253%-150 - C4 -3UHF 4.7 MURI_CAMJE
62 HHSearch 84.0555%-145 - C4 -3UHF 4.6 MURI_CAMJE
8 PsiBlast_PDB 83.5053%-150 - C4 -3UHP - MURI_CAMJE -
1 PsiBlast_PDB 82.96100% -94 - C- -2JFX - MURI_HELPJ -
28 PsiBlast_CBE 82.9053%-146 - C4 -3UHO 4.3 MURI_CAMJE
25 PsiBlast_CBE 82.83100% -96 - C- -2JFZ - MURI_HELPJ -
63 HHSearch 72.4936%-129 * C4 *2VVT 4.5 MURI_ENTFA
11 PsiBlast_PDB 72.4835%-136 - C4 -2VVT 4.5 MURI_ENTFA
32 PsiBlast_CBE 71.8235%-138 - C4 -2JFO 3.6 MURI_ENTFA
13 PsiBlast_PDB 71.1735%-138 - C4 -2JFP 4.4 MURI_ENTFA
31 PsiBlast_CBE 70.6635%-136 - C4 -2JFP 4.3 MURI_ENTFA
12 PsiBlast_PDB 70.5135%-135 - C4 -2JFO 4.4 MURI_ENTFA
30 PsiBlast_CBE 70.0735%-136 - C4 -2VVT 4.5 MURI_ENTFA
64 HHSearch 68.4233%-125 - C4 -3IST 4.0 MURI_LISMO
47 Fugue 68.2932%-132 - C4 -2JFV 4.8 ?
58 HHSearch 68.1934%-127 - C4 -1ZUW 4.5 MURI1_BACSU
42 PsiBlast_CBE 67.9932%-134 - C4 -2DWU 4.6 ?
44 PsiBlast_CBE 67.9832%-135 - C4 -2DWU 4.6 ?
18 PsiBlast_PDB 67.8733%-136 - C4 -2JFW 3.3 ?
34 PsiBlast_CBE 67.8432%-134 - C4 -1ZUW 4.2 MURI1_BACSU
43 PsiBlast_CBE 67.4032%-132 - C4 -2DWU 4.5 ?
14 PsiBlast_PDB 67.4032%-132 - C4 -1ZUW 4.5 MURI1_BACSU
17 PsiBlast_PDB 67.3233%-136 - C4 -2JFV 4.8 ?
57 HHSearch 66.8532%-125 - C4 -2DWU 4.6 ?
65 HHSearch 66.8431%-138 - C4 -3OUT 4.3 ?
33 PsiBlast_CBE 66.2232%-130 - C4 -1ZUW 4.7 MURI1_BACSU
35 PsiBlast_CBE 65.9334%-122 - C4 -2JFQ 4.3 MURI_STAAR
15 PsiBlast_PDB 63.9634%-117 - C4 -2JFQ 4.5 MURI_STAAR
48 Fugue 62.1936%-128 - C4 -1B74 2.4 MURI_AQUPY
49 Fugue 60.0436%-129 - C4 -1B74 2.4 MURI_AQUPY