@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0508: (2015-12-16 )
MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNGLEEKGYKAAVIKFDAASESDFVEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIENNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_8(3RSH)
FABG_VIBCH
[Raw transfer]



NAD_D_12(4IIN)
?
[Raw transfer]



NAD_A_5(4IIN)
?
[Raw transfer]



NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]



NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]



NAD_C_10(4IIN)
?
[Raw transfer]



NAD_B_7(4IIN)
?
[Raw transfer]



NAP_B_14(1Q7B)
FABG_ECOLI
[Raw transfer]



NAP_D_16(1Q7B)
FABG_ECOLI
[Raw transfer]



NAP_A_13(1Q7B)
FABG_ECOLI
[Raw transfer]



NAP_C_15(1Q7B)
FABG_ECOLI
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



1PE_B_5(2PNF)
FABG_AQUAE
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



PG4_A_4(3SJ7)
?
[Raw transfer]



1PE_A_6(2PNF)
FABG_AQUAE
[Raw transfer]



PG4_B_7(3SJ7)
?
[Raw transfer]
23 PsiBlast_CBE 92.3798% -87 - C1 -4IIN 8.1 ?
22 PsiBlast_CBE 89.1398% -88 - C1 -4IIN 9.4 ?
1 PsiBlast_PDB 89.1198% -89 - C1 -4IIN 7.2 ?
24 PsiBlast_CBE 88.9798% -87 - C1 -4IIN 9.3 ?
2 PsiBlast_PDB 86.7998% -86 - C1 -4IJK - ? -
21 PsiBlast_CBE 84.5198% -89 - C1 -4IJK - ? -
100 PsiBlast_CBE 70.1639% -86 - C1 -4BNV - FABG_PSEAE -
68 PsiBlast_CBE 69.4839% -85 - C1 -4BO4 - FABG_PSEAE -
67 PsiBlast_CBE 69.1739% -85 - C1 -4BO4 - FABG_PSEAE -
7 PsiBlast_PDB 69.1644% -71 - C1 -2P68 - FABG_AQUAE -
58 PsiBlast_CBE 69.1139% -82 - C1 -4BO7 - FABG_PSEAE -
55 PsiBlast_CBE 68.7539% -83 - C1 -4BO7 - FABG_PSEAE -
89 PsiBlast_CBE 68.7139% -86 - C1 -4BNY - FABG_PSEAE -
50 PsiBlast_CBE 68.6939% -80 - C1 -4BO9 - FABG_PSEAE -
103 PsiBlast_CBE 68.5539% -87 - C1 -4BNU - FABG_PSEAE -
91 PsiBlast_CBE 68.5539% -87 - C1 -4BNX - FABG_PSEAE -
16 PsiBlast_PDB 68.4345% -86 - C1 -3F9I - FABG_RICPR -
87 PsiBlast_CBE 68.3839% -83 - C1 -4BNY - FABG_PSEAE -
29 PsiBlast_CBE 68.2644% -70 - C1 -2PNF 1.5 FABG_AQUAE
101 PsiBlast_CBE 68.0639% -84 - C1 -4BNV - FABG_PSEAE -
6 PsiBlast_PDB 67.8444% -70 - C1 -2PNF 2.3 FABG_AQUAE
36 PsiBlast_CBE 62.2244% -67 - C1 -4I08 9.3 FABG_VIBCH
35 PsiBlast_CBE 61.8842% -70 - C1 -3SJ7 1.9 ?
12 PsiBlast_PDB 61.6144% -66 - C1 -3RSH 10.9 FABG_VIBCH
11 PsiBlast_PDB 60.5242% -70 - C1 -3SJ7 1.9 ?
37 PsiBlast_CBE 60.0744% -67 - C1 -3RSH 9.7 FABG_VIBCH
38 PsiBlast_CBE 60.0444% -66 - C1 -3RRO 2.6 FABG_VIBCH
13 PsiBlast_PDB 59.0144% -65 - C1 -3RRO 2.6 FABG_VIBCH
25 PsiBlast_CBE 57.0445% -55 - C1 -1Q7B 8.0 FABG_ECOLI
26 PsiBlast_CBE 56.4045% -57 - C1 -1Q7B 8.4 FABG_ECOLI
4 PsiBlast_PDB 56.4045% -56 - C1 -1Q7B 8.3 FABG_ECOLI
27 PsiBlast_CBE 56.3245% -55 - C1 -1Q7B 8.6 FABG_ECOLI