@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0521: (2015-12-16 )
MNKPLNTAQVFIGSDHAGLHLAEFVKHFLEDKRFKIQAFLPTTRVDYPDYAKLVCQKVLENAQSYGILVCATGIGMSMGANRFKGIRAALCLDAYMAKMTRLHNNANVLCLGEKISGIGVAESILEAFFSTEFEQGRHVLRIQKLDESLKS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

R52_B_6(3K7S)
?
[Raw transfer]




R52_D_8(3K7S)
?
[Raw transfer]




RES_A_3(3K8C)
?
[Raw transfer]




R5P_A_3(3HEE)
?
[Raw transfer]




RES_B_4(3K8C)
?
[Raw transfer]




R52_A_5(3K7S)
?
[Raw transfer]




R5P_B_4(3HEE)
?
[Raw transfer]




RB5_A_3(3PH3)
?
[Raw transfer]




RB5_A_3(3PH3)
?
[Raw transfer]




RB5_B_4(3PH3)
?
[Raw transfer]




AOS_A_3(3PH4)
?
[Raw transfer]




AOS_B_4(3PH4)
?
[Raw transfer]




GOL_B_4(3HE8)
?
[Raw transfer]




GOL_A_3(3HE8)
?
[Raw transfer]




40 HHSearch 95.2740%-140 * C7 *3HE8 2.7 ?
21 PsiBlast_CBE 95.2439%-145 - C7 -3PH4 1.9 ?
41 HHSearch 95.1639%-141 - C7 -3PH3 2.3 ?
3 PsiBlast_PDB 94.1139%-144 - C7 -3PH3 2.3 ?
24 PsiBlast_CBE 93.8339%-142 - C7 -3HE8 2.9 ?
4 PsiBlast_PDB 93.5339%-142 - C7 -3HE8 - ? -
23 PsiBlast_CBE 93.4539%-141 - C7 -3HEE 2.9 ?
2 PsiBlast_PDB 93.1539%-145 - C7 -3PH4 3.0 ?
5 PsiBlast_PDB 93.0139%-141 - C7 -3HEE 3.0 ?
22 PsiBlast_CBE 92.9239%-142 - C7 -3PH3 2.3 ?
43 HHSearch 90.4843%-145 - C7 -3S5P - ? -
6 PsiBlast_PDB 90.2945%-148 - C7 -3S5P - ? -
1 PsiBlast_PDB 90.1145%-138 - C7 -4EM8 - ? -
42 HHSearch 90.0038%-133 - C7 -3K7P - ? -
29 PsiBlast_CBE 89.7838%-140 - C7 -3K7S 3.6 ?
26 PsiBlast_CBE 89.7738%-141 - C7 -3K8C 3.3 ?
30 PsiBlast_CBE 89.3838%-136 - C7 -3M1P - ? -
28 PsiBlast_CBE 89.3238%-136 - C7 -3K7S - ? -
10 PsiBlast_PDB 89.0438%-135 - C7 -3M1P - ? -
27 PsiBlast_CBE 88.7138%-139 - C7 -3K7S 3.2 ?
9 PsiBlast_PDB 88.2738%-137 - C7 -3K8C 2.8 ?
8 PsiBlast_PDB 87.9738%-138 - C7 -3K7S 2.5 ?