@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0524: (2015-12-16 )
MPNRGVVLLDGQALAYNIEKDLKNKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACQRVGMDFDLKTLKENITEAELLSLIKDYNTDQNISGILVQLPLPRSIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTKNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDGRIVGDVDFINAQKIAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

L34_A_6(4B4V)
?
[Raw transfer]




L34_B_9(4B4V)
?
[Raw transfer]




9L9_A_6(4B4W)
?
[Raw transfer]




9L9_B_9(4B4W)
?
[Raw transfer]




9L9_B_7(4CJX)
?
[Raw transfer]




9L9_A_5(4CJX)
?
[Raw transfer]




NAP_A_3(3NGL)
FOLD_THEAC
[Raw transfer]




L37_A_6(1DIG)
C1TC_HUMAN
[Raw transfer]




NAP_C_4(3NGL)
FOLD_THEAC
[Raw transfer]




NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]




NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]




L24_A_5(1DIA)
C1TC_HUMAN
[Raw transfer]




NAP_C_3(1DIB)
C1TC_HUMAN
[Raw transfer]




NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]




NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]




EDO_B_14(4B4U)
?
[Raw transfer]




EDO_A_7(4B4U)
?
[Raw transfer]




IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]




IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]




IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]




37 HHSearch 96.5852%-124 - C7 -3P2O 8.9 FOLD_CAMJE
1 PsiBlast_PDB 95.0853%-128 - C7 -3P2O 8.9 FOLD_CAMJE
36 HHSearch 92.2247%-122 - C7 -3L07 3.8 FOLD_FRATT
24 PsiBlast_CBE 92.1043%-123 - C7 -4B4U 3.0 ?
23 PsiBlast_CBE 92.0843%-122 - C7 -4B4V 5.5 ?
40 HHSearch 91.8247%-116 - C7 -1B0A - FOLD_ECOLI -
56 Fugue 91.7247%-117 * C7 *1B0A - FOLD_ECOLI -
22 PsiBlast_CBE 91.6943%-121 - C7 -4B4W 4.6 ?
21 PsiBlast_CBE 91.4747%-120 - C7 -3L07 3.7 FOLD_FRATT
3 PsiBlast_PDB 91.4147%-122 - C7 -3L07 3.8 FOLD_FRATT
5 PsiBlast_PDB 91.2643%-121 - C7 -4B4U 2.8 ?
7 PsiBlast_PDB 90.9843%-119 - C7 -4B4W 5.3 ?
6 PsiBlast_PDB 90.9543%-120 - C7 -4B4V 5.4 ?
2 PsiBlast_PDB 90.5948%-121 - C7 -1B0A - FOLD_ECOLI -
31 PsiBlast_CBE 90.3937%-118 - C7 -4CJX 6.0 ?
10 PsiBlast_PDB 88.8440%-124 - C7 -4A26 - ? -
25 PsiBlast_CBE 88.3840%-120 - C7 -4A26 - ? -
17 PsiBlast_PDB 87.8337%-114 - C7 -4CJX 6.3 ?
4 PsiBlast_PDB 87.3646%-109 - C7 -4A5O - FOLD_PSEAE -
27 PsiBlast_CBE 86.0336%-122 - C7 -1DIB - C1TC_HUMAN -
11 PsiBlast_PDB 85.5136%-122 - C7 -1DIA 4.9 C1TC_HUMAN
13 PsiBlast_PDB 85.2036%-121 - C7 -1DIG 3.9 C1TC_HUMAN
38 HHSearch 84.8536%-112 - C7 -1A4I 8.1 C1TC_HUMAN
12 PsiBlast_PDB 84.6036%-120 - C7 -1DIB 6.7 C1TC_HUMAN
14 PsiBlast_PDB 84.4136%-118 - C7 -1A4I 8.1 C1TC_HUMAN
30 PsiBlast_CBE 83.0136%-115 - C7 -3NGL 7.8 FOLD_THEAC
15 PsiBlast_PDB 82.3036%-115 - C7 -3NGL 7.7 FOLD_THEAC