@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0564: (2015-12-16 )
MNLDQLEVSHDADSLCVVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQG

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

POP_A_11(2AUU)
IPYR_ECOLI
[Raw transfer]




POP_A_13(2AU9)
IPYR_ECOLI
[Raw transfer]




POP_A_10(1I6T)
IPYR_ECOLI
[Raw transfer]




POP_A_7(2BQY)
IPYR_HELPY
[Raw transfer]




POP_A_5(3EIY)
?
[Raw transfer]




POP_A_14(2AU6)
IPYR_ECOLI
[Raw transfer]




2 PsiBlast_PDB 93.4298% -93 - C7 -2BQY 4.0 IPYR_HELPY
128 HHSearch 93.0198% -98 * C7 *2BQX - IPYR_HELPY -
1 PsiBlast_PDB 93.0198% -98 - C7 -2BQX - IPYR_HELPY -
44 PsiBlast_CBE 80.2844% -90 - C7 -3FQ3 - ? -
38 PsiBlast_CBE 80.2744% -88 - C7 -3FQ3 - ? -
40 PsiBlast_CBE 80.0144% -87 - C7 -3FQ3 - ? -
137 HHSearch 79.8948% -84 - C7 -3D53 - IPYR_RICPR -
47 PsiBlast_CBE 79.8644% -89 - C7 -3FQ3 - ? -
42 PsiBlast_CBE 79.6444% -95 - C7 -3FQ3 - ? -
49 PsiBlast_CBE 79.5144% -91 - C7 -3FQ3 - ? -
41 PsiBlast_CBE 79.4344% -90 - C7 -3FQ3 - ? -
45 PsiBlast_CBE 79.3744% -89 - C7 -3FQ3 - ? -
130 HHSearch 79.3245% -91 - C7 -3FQ3 - ? -
48 PsiBlast_CBE 79.1044% -84 - C7 -3FQ3 - ? -
46 PsiBlast_CBE 78.9444% -87 - C7 -3FQ3 - ? -
31 PsiBlast_CBE 78.8048% -89 - C7 -3D53 - IPYR_RICPR -
64 PsiBlast_CBE 78.6043% -87 - C7 -3SW5 - ? -
43 PsiBlast_CBE 78.4244% -90 - C7 -3FQ3 - ? -
5 PsiBlast_PDB 78.1948% -85 - C7 -3D53 - IPYR_RICPR -
63 PsiBlast_CBE 77.8243% -89 - C7 -3SW5 - ? -
10 PsiBlast_PDB 71.6449% -83 - C7 -3EIY 3.4 ?
57 PsiBlast_CBE 69.2352% -72 - C7 -1I6T 3.3 IPYR_ECOLI
53 PsiBlast_CBE 69.1652% -73 - C7 -2AU6 3.4 IPYR_ECOLI
51 PsiBlast_CBE 68.3752% -70 - C7 -2AU9 2.9 IPYR_ECOLI
50 PsiBlast_CBE 67.1652% -69 - C7 -2AUU 2.8 IPYR_ECOLI