@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0567: (2015-12-16 )
MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDIAISPSVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILKDKRVFSVCGAHGKSSITAMLSAICPAFGAIIGAHSKEFDSNVRESADMSLVFEADESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQKRVIYKEDPFLKNYSKDAIVLEKKDIYNIQYILKDGEPYTSFELKNLGAFLVWGLGEHNATNASLAILSALDELNLEEIRNNLLNFKGIKKRFDILQKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVKRDIDLKAHFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_8(1P3D)
MURC_HAEIN
[Raw transfer]




ACP_B_5(1GQY)
MURC_HAEIN
[Raw transfer]




ACP_A_3(1GQY)
MURC_HAEIN
[Raw transfer]




UMA_A_7(1P3D)
MURC_HAEIN
[Raw transfer]




UMA_A_7(1P3D)
MURC_HAEIN
[Raw transfer]




EPU_A_7(1P31)
MURC_HAEIN
[Raw transfer]




GOL_A_14(4BUC)
MURD_THEMA
[Raw transfer]




4 PsiBlast_PDB 95.8632% -80 - C1 -1P3D 9.6 MURC_HAEIN
3 PsiBlast_PDB 95.0332% -86 - C1 -1P31 6.5 MURC_HAEIN
21 PsiBlast_CBE 93.6132% -82 - C1 -1GQY 9.8 MURC_HAEIN
31 HHSearch 92.4233% -71 - C1 -1P3D 8.0 MURC_HAEIN
1 PsiBlast_PDB 92.4232% -81 - C1 -1GQY 9.7 MURC_HAEIN
22 PsiBlast_CBE 85.1233% -81 - C1 -4HV4 - MURC_YERPE -
2 PsiBlast_PDB 84.4133% -81 - C1 -4HV4 - MURC_YERPE -
6 PsiBlast_PDB 83.8731% -82 - C1 -2F00 - MURC_ECOLI -
35 HHSearch 71.9924% -81 - C1 -3EAG - ? -
32 HHSearch 69.8920% -79 * C1 *3LK7 - MURD_STRA5 -
58 Fugue 69.2920% -72 - C1 -4BUC 2.9 MURD_THEMA
8 PsiBlast_PDB 68.0223% -87 - C1 -3EAG - ? -
5 PsiBlast_PDB 67.5730% 11 - C1 -1J6U - MURC_THEMA -
28 HHSearch 62.0830% 11 - C1 -1J6U - MURC_THEMA -
38 HHSearch 57.5715% -71 - C1 -3NRS - ? -
29 HHSearch 54.8922% 4 - C1 -3HN7 - ? -
61 Fugue 54.2312% -51 - C1 -2VOS - ? -
36 HHSearch 52.8017% -59 - C1 -1O5Z - ? -
7 PsiBlast_PDB 51.2525% 11 - C1 -3HN7 - ? -
37 HHSearch 50.7115% -48 - C1 -2VOS - ? -