@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0594: (2015-12-16 )
MRIEHDFIGQMEISDEVYYGIQTLRASENFFITNDKLCSYPVFIKSFAQVKKAAALANAQLGLIDEKLKIAICHACDLLVDGKYHDQFIVDMIQGGAGTSTNMNMNEVIANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYPSALKIAIYERLSNLVAPMKALRDAFAQKAKEFAHVIKMGRTQLQDAVPMTLGQEFETYALMVDRDIEQVLDARNWVRELNLGGTVIGTGINSHPDYRSLIEKKIQEVTGRPFVMANNLIEATQSTGAYVQVSGVLKRIAVKLSKVCNDLRLLSSGPRAGLNEINLPKMQPGSSIMPGKVNPVIPEVVNQVCFAVIGNDLSVALAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEKICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSPHAFKKHKD

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_4(1FUQ)
FUMC_ECOLI
[Raw transfer]



PMA_A_9(1FUP)
FUMC_ECOLI
[Raw transfer]



PMA_B_11(1FUP)
FUMC_ECOLI
[Raw transfer]



CIT_A_5(2FUS)
FUMC_ECOLI
[Raw transfer]



CIT_B_7(2FUS)
FUMC_ECOLI
[Raw transfer]



CIT_A_9(1FUO)
FUMC_ECOLI
[Raw transfer]



CIT_G_7(1KQ7)
FUMC_ECOLI
[Raw transfer]



CIT_B_6(1FUQ)
FUMC_ECOLI
[Raw transfer]



CIT_I_9(1KQ7)
FUMC_ECOLI
[Raw transfer]



CIT_B_11(1FUO)
FUMC_ECOLI
[Raw transfer]



UNL_A_3(3TV2)
?
[Raw transfer]
24 PsiBlast_CBE 97.2751% -97 - C4 -3R6V - ? -
28 PsiBlast_CBE 96.9751% -95 - C4 -3R6V - ? -
27 PsiBlast_CBE 96.4651% -97 - C4 -3R6V - ? -
23 PsiBlast_CBE 96.2751% -94 - C4 -3R6V - ? -
22 PsiBlast_CBE 96.2151% -96 - C4 -3R6V - ? -
26 PsiBlast_CBE 96.1151% -95 - C4 -3R6V - ? -
29 PsiBlast_CBE 95.7851% -98 - C4 -3R6Q - ? -
3 PsiBlast_PDB 95.7851% -96 - C4 -3R6Q - ? -
34 PsiBlast_CBE 95.2151% -88 - C4 -3OCE - ? -
25 PsiBlast_CBE 94.9051% -94 - C4 -3R6V - ? -
30 PsiBlast_CBE 94.8951% -95 - C4 -3R6Q - ? -
33 PsiBlast_CBE 94.6651% -91 - C4 -3OCE - ? -
32 PsiBlast_CBE 94.5451% -85 - C4 -3OCE - ? -
31 PsiBlast_CBE 94.5051% -96 - C4 -3R6Q - ? -
2 PsiBlast_PDB 94.4151% -94 - C4 -1J3U - ? -
76 HHSearch 94.1251% -91 - C4 -3R6Q - ? -
4 PsiBlast_PDB 93.9551% -96 - C4 -3R6V - ? -
5 PsiBlast_PDB 92.9051% -91 - C4 -3OCE - ? -
77 HHSearch 91.1351% -84 - C4 -3OCF - ? -
36 PsiBlast_CBE 90.8952% -88 - C4 -3OCF - ? -
45 PsiBlast_CBE 86.6638% -88 - C4 -1FUQ 3.2 FUMC_ECOLI
44 PsiBlast_CBE 86.5339% -87 - C4 -1KQ7 2.4 FUMC_ECOLI
47 PsiBlast_CBE 86.4239% -88 - C4 -1FUO 3.7 FUMC_ECOLI
9 PsiBlast_PDB 86.2541% -87 - C4 -3TV2 2.8 ?
12 PsiBlast_PDB 85.9439% -84 - C4 -1KQ7 3.4 FUMC_ECOLI
49 PsiBlast_CBE 85.6739% -87 - C4 -2FUS 2.8 FUMC_ECOLI
15 PsiBlast_PDB 85.6739% -86 - C4 -1FUO 3.6 FUMC_ECOLI
46 PsiBlast_CBE 85.2038% -86 - C4 -1FUP 4.2 FUMC_ECOLI
14 PsiBlast_PDB 84.7538% -86 - C4 -1FUQ 3.7 FUMC_ECOLI
13 PsiBlast_PDB 84.5938% -86 - C4 -1FUP 4.2 FUMC_ECOLI
18 PsiBlast_PDB 83.4339% -86 - C4 -2FUS 3.6 FUMC_ECOLI