@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0624: (2015-12-17 )
MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILEVAFSISNDVHLVLHHQQERIKEAVSKRFKGVIFHAQIVEKYSGTGGAIMQENKTPIPTQHERVLILNADMPLITKDALTPLLESHNNAIGLLHLADPKGYGRVILENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFLEEECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYLEKGVSFKGECVLEQGVRLIGNCLIENARIKAYSVIEESQIINSSVGPFAHARPKSVICDSHVGNFVETKNAKLQGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_A_2(3D8V)
GLMU_MYCTU
[Raw transfer]




UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_4(3DJ4)
GLMU_MYCTU
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_B_13(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_B_14(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3P)
?
[Raw transfer]




UD1_B_11(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_8(3ST8)
GLMU_MYCTU
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_2(4G3S)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(3SPT)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(4G87)
GLMU_MYCTU
[Raw transfer]




1SE_A_12(4KPX)
GLMU_HAEIN
[Raw transfer]




UD1_V_22(1FWY)
GLMU_ECOLI
[Raw transfer]




1SG_A_12(4KQL)
GLMU_HAEIN
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_S_19(1FWY)
GLMU_ECOLI
[Raw transfer]




0N5_A_6(4E1K)
GLMU_HAEIN
[Raw transfer]




1S9_A_2(4KNX)
GLMU_HAEIN
[Raw transfer]




1S8_A_2(4KNR)
GLMU_HAEIN
[Raw transfer]




ATP_A_2(4K6R)
GLMU_MYCTO
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




1SF_A_2(4KPZ)
GLMU_HAEIN
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




GN1_A_3(4HCQ)
GLMU_MYCTU
[Raw transfer]




POP_A_2(4G3P)
?
[Raw transfer]




POP_A_2(4G3Q)
GLMU_MYCTU
[Raw transfer]




25 PsiBlast_CBE 94.9839%-114 - C1 -4AC3 - GLMU_STRR6 -
122 Fugue 94.4340%-115 - C1 -1HM9 3.1 GLMU_STRPN
28 PsiBlast_CBE 94.1539%-113 - C1 -1HM9 9.0 GLMU_STRPN
30 PsiBlast_CBE 93.9739%-113 - C1 -1HM8 - GLMU_STRPN -
26 PsiBlast_CBE 93.8839%-116 - C1 -4AAW - GLMU_STRR6 -
27 PsiBlast_CBE 93.6239%-110 - C1 -1HM9 8.9 GLMU_STRPN
29 PsiBlast_CBE 93.4139%-112 - C1 -1HM8 - GLMU_STRPN -
6 PsiBlast_PDB 92.9939%-118 - C1 -4FCE - GLMU_YERPE -
2 PsiBlast_PDB 92.8838%-116 - C1 -2OI5 - GLMU_ECOLI -
7 PsiBlast_PDB 92.6639%-112 - C1 -2V0H - GLMU_HAEIN -
33 PsiBlast_CBE 92.6139%-109 - C1 -1G97 9.4 GLMU_STRPN
10 PsiBlast_PDB 92.6039%-115 - C1 -2V0K - GLMU_HAEIN -
4 PsiBlast_PDB 92.5738%-114 - C1 -2OI7 - GLMU_ECOLI -
3 PsiBlast_PDB 92.5338%-115 - C1 -2OI6 - GLMU_ECOLI -
18 PsiBlast_PDB 92.4939%-112 - C1 -4KPX 7.0 GLMU_HAEIN
19 PsiBlast_PDB 92.4439%-113 - C1 -4KPZ 4.1 GLMU_HAEIN
15 PsiBlast_PDB 92.4439%-115 - C1 -4E1K 6.4 GLMU_HAEIN
31 PsiBlast_CBE 92.4039%-114 - C1 -1HM0 - GLMU_STRPN -
24 PsiBlast_CBE 92.4038%-113 - C1 -1HV9 8.0 GLMU_ECOLI
20 PsiBlast_PDB 92.3339%-112 - C1 -4KQL 7.5 GLMU_HAEIN
17 PsiBlast_PDB 92.2239%-113 - C1 -4KNX 6.6 GLMU_HAEIN
16 PsiBlast_PDB 92.2139%-112 - C1 -4KNR 5.7 GLMU_HAEIN
23 PsiBlast_CBE 91.9038%-113 - C1 -2OI5 7.2 GLMU_ECOLI
21 PsiBlast_CBE 91.7638%-112 - C1 -2OI7 7.1 GLMU_ECOLI
40 PsiBlast_CBE 91.4532%-114 - C1 -3ST8 7.3 GLMU_MYCTU
22 PsiBlast_CBE 91.3738%-112 - C1 -2OI6 7.6 GLMU_ECOLI
34 PsiBlast_CBE 91.2332%-110 - C1 -4K6R 2.1 GLMU_MYCTO
121 Fugue 91.2239%-110 - C1 -1HV9 2.3 GLMU_ECOLI
38 PsiBlast_CBE 91.0232%-111 - C1 -4G3Q 7.6 GLMU_MYCTU
41 PsiBlast_CBE 90.6932%-115 - C1 -3SPT 3.5 GLMU_MYCTU
132 HHSearch 90.6839%-108 - C1 -1HM9 7.9 GLMU_STRPN
39 PsiBlast_CBE 90.4632%-115 - C1 -4G3P 3.5 ?
36 PsiBlast_CBE 90.4632%-116 - C1 -4G87 3.0 GLMU_MYCTU
43 PsiBlast_CBE 90.3132%-111 - C1 -3D8V 3.1 GLMU_MYCTU
37 PsiBlast_CBE 89.9132%-114 - C1 -4G3S 7.3 GLMU_MYCTU
35 PsiBlast_CBE 89.5732%-114 - C1 -4HCQ 3.6 GLMU_MYCTU
42 PsiBlast_CBE 88.7432%-107 - C1 -3DJ4 8.7 GLMU_MYCTU
47 PsiBlast_CBE 76.4832%-127 - C1 -1FWY 5.7 GLMU_ECOLI
46 PsiBlast_CBE 75.5232%-128 - C1 -1FWY 6.0 GLMU_ECOLI
45 PsiBlast_CBE 74.8632%-124 - C1 -1FXJ 2.8 GLMU_ECOLI
123 Fugue 74.4931%-113 - C1 -1FXJ 2.8 GLMU_ECOLI