@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0685: (2015-12-17 )
MSVIIAANNLCLQYQQNEPVIKHANLRIKRKDFVFISGPSGSGKSTLLRSFYGDLKVFSGKLEVCNINMNNASKSTILDLRKNIGVVFQDYKLIQDYTIEQNIKLPMVICGIKKEECHLQLEKLLGHIDLRHKANRYPKELSGGEQQRVAMARAMANCPELILADEPTGNLDDYSSDKIWSLLRGMNTQLNATIVVVTHKFPKNFSAYHRKFYIEEGEVYEYS

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




1 PsiBlast_PDB 95.0139%-112 - C1 -1L2T - Y796_METJA -
3 PsiBlast_PDB 93.6738%-115 - C1 -3TIF - Y796_METJA -
21 PsiBlast_CBE 93.4139%-109 - C1 -1L2T 6.5 Y796_METJA
2 PsiBlast_PDB 93.3239%-110 - C1 -1F3O 5.7 Y796_METJA
22 PsiBlast_CBE 91.7438%-113 - C1 -3TIF - Y796_METJA -
5 PsiBlast_PDB 78.8139%-103 - C1 -2PCL - LOLD_AQUAE -
23 PsiBlast_CBE 78.7839%-106 - C1 -2PCJ - LOLD_AQUAE -
4 PsiBlast_PDB 75.3439% -99 - C1 -2PCJ - LOLD_AQUAE -
120 HHSearch 75.2829%-100 - C1 -3GFO - ECFA3_CLOP1 -
129 HHSearch 74.3830%-102 - C1 -1B0U - HISP_SALTY -
86 PsiBlast_CBE 72.5231%-102 - C1 -1B0U 4.5 HISP_SALTY
126 HHSearch 72.4532%-101 - C1 -2OLJ - ? -
51 PsiBlast_CBE 71.3331%-112 - C1 -3TUZ - METN_ECOLI -
127 HHSearch 71.2836% -94 - C1 -2PCJ - LOLD_AQUAE -
118 HHSearch 71.1530% -98 - C1 -3RLF - MALK_ECOLI -
111 HHSearch 70.4430% -96 - C1 -3TUI - METN_ECOLI -
14 PsiBlast_PDB 67.8934%-100 - C1 -2OUK - ? -
13 PsiBlast_PDB 67.6334% -95 - C1 -2OLK 4.0 ?
48 PsiBlast_CBE 67.5931%-110 - C1 -3TUZ - METN_ECOLI -
105 Fugue 67.4230% -92 - C1 -1Z47 - ? -
36 PsiBlast_CBE 65.6734% -95 - C1 -2OLK 4.7 ?
40 PsiBlast_CBE 64.5734% -93 - C1 -4YMU 4.5 ?
20 PsiBlast_PDB 64.0334% -91 - C1 -4YMV 4.8 ?
47 PsiBlast_CBE 63.6732% -94 - C1 -4U00 4.5 ?
12 PsiBlast_PDB 63.4434% -92 - C1 -2OLJ 4.2 ?
37 PsiBlast_CBE 63.2034% -91 - C1 -2OLK 4.3 ?
19 PsiBlast_PDB 63.1934% -91 - C1 -4YMU 4.9 ?
39 PsiBlast_CBE 62.4434% -90 - C1 -4YMV 4.0 ?
15 PsiBlast_PDB 61.8834% -90 - C1 -2Q0H 3.4 ?
35 PsiBlast_CBE 61.4334% -88 - C1 -2OLK 4.4 ?
30 PsiBlast_CBE 61.4034% -89 - C1 -3C4J 3.7 ?
41 PsiBlast_CBE 60.8934% -89 - C1 -3C41 4.0 ?
31 PsiBlast_CBE 60.8534% -90 - C1 -2Q0H 4.4 ?
16 PsiBlast_PDB 59.0634% -85 - C1 -3C4J 4.9 ?
42 PsiBlast_CBE 58.5034% -86 - C1 -3C41 5.1 ?
38 PsiBlast_CBE 57.0934% -82 - C1 -2OLJ 3.8 ?
100 PsiBlast_CBE 53.6531% -94 - C1 -2FGJ 6.9
95 PsiBlast_CBE 51.1531% -86 - C1 -2FGK 7.3
97 PsiBlast_CBE 49.2131% -85 - C1 -2FGK 7.4 HLYBP_ECOLX
98 PsiBlast_CBE 49.0631% -85 - C1 -2FGK 7.5 HLYBP_ECOLX
96 PsiBlast_CBE 48.6931% -86 - C1 -2FGK 6.8 HLYBP_ECOLX
91 PsiBlast_CBE 48.3032% -79 - C1 -2FF7 6.6
99 PsiBlast_CBE 47.4031% -76 - C1 -2FFB 6.3
93 PsiBlast_CBE 47.2132% -79 - C1 -2PMK 7.1
94 PsiBlast_CBE 45.1931% -78 - C1 -3B5J 6.9