@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0700: (2015-12-17 )
MFNFFKKIVNKIKGEEVKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVFVEQ

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_B_11(4C7O)
FTSY_ECOLI
[Raw transfer]




GCP_A_5(1RJ9)
FTSY_THEAQ
[Raw transfer]




GDP_B_17(3DM5)
SRP54_PYRFU
[Raw transfer]




GDP_A_6(1O87)
SRP54_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
SRP54_THEAQ
[Raw transfer]




GNP_B_20(2J7P)
SRP54_THEAQ
[Raw transfer]




GNP_A_12(2J7P)
SRP54_THEAQ
[Raw transfer]




GNP_K_11(2Q9C)
FTSY_THEAQ
[Raw transfer]




GNP_T_20(2Q9B)
FTSY_THEAQ
[Raw transfer]




GNP_A_6(1JPN)
SRP54_THEAQ
[Raw transfer]




GDP_A_16(3DM5)
SRP54_PYRFU
[Raw transfer]




GNP_B_5(1JPN)
SRP54_THEAQ
[Raw transfer]




GNP_B_2(1JPJ)
SRP54_THEAQ
[Raw transfer]




GDP_D_2(2IYL)
FTSY_THEAQ
[Raw transfer]




GDP_B_12(1O87)
SRP54_THEAQ
[Raw transfer]




GDP_B_2(2NG1)
SRP54_THEAQ
[Raw transfer]




GDP_C_2(3E70)
?
[Raw transfer]




GDP_A_7(1NG1)
SRP54_THEAQ
[Raw transfer]




GDP_C_2(3E70)
?
[Raw transfer]




GOL_B_14(3DMD)
?
[Raw transfer]




CIT_B_4(1VMA)
?
[Raw transfer]




GOL_C_16(3DMD)
?
[Raw transfer]




EDO_A_2(2YHS)
FTSY_ECOLI
[Raw transfer]




GDP_A_8(4C7O)
FTSY_ECOLI
[Raw transfer]




GCP_D_17(1OKK)
SRP54_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GDP_D_18(4C7O)
FTSY_ECOLI
[Raw transfer]




GDP_D_17(4C7O)
SRP54_ECOLI
[Raw transfer]




GDP_B_11(4C7O)
SRP54_ECOLI
[Raw transfer]




85 HHSearch 93.2840% -99 - C8 -2YHS 3.1 FTSY_ECOLI
93 HHSearch 92.6841% -90 - C8 -1VMA - ? -
7 PsiBlast_PDB 92.0241% -93 - C8 -1VMA - ? -
18 PsiBlast_PDB 91.9937% -97 - C8 -1ZU4 - FTSY_MYCMS -
23 PsiBlast_CBE 91.9041% -90 - C8 -1VMA 3.9 ?
10 PsiBlast_PDB 91.0243%-109 - C8 -2Q9A - FTSY_THEAQ -
14 PsiBlast_PDB 90.6239%-106 - C8 -4AK9 - ? -
9 PsiBlast_PDB 90.5643%-121 - C8 -2IYL 7.2 FTSY_THEAQ
19 PsiBlast_PDB 90.3837% -94 - C8 -1ZU5 - FTSY_MYCMS -
82 HHSearch 90.1533%-100 - C8 -2OG2 - CFTSY_ARATH -
11 PsiBlast_PDB 89.9843%-108 - C8 -2Q9B 5.8 FTSY_THEAQ
12 PsiBlast_PDB 89.7843%-107 - C8 -2Q9C 6.3 FTSY_THEAQ
8 PsiBlast_PDB 89.6543%-105 - C8 -2CNW - FTSY_THEAQ -
13 PsiBlast_PDB 88.9942%-105 - C8 -1RJ9 9.1 FTSY_THEAQ
24 PsiBlast_CBE 88.5743%-104 - C8 -2CNW - FTSY_THEAQ -
81 HHSearch 88.5133%-101 - C8 -3B9Q - CFTSY_ARATH -
84 HHSearch 83.7336% -81 * C8 *3E70 7.3 ?
1 PsiBlast_PDB 83.3849%-107 - C8 -2YHS - FTSY_ECOLI -
91 HHSearch 83.2436% -99 - C8 -1RJ9 2.5 FTSY_THEAQ
90 HHSearch 83.2428% -94 - C8 -3DM5 - SRP54_PYRFU -
6 PsiBlast_PDB 83.0649% -95 - C8 -4C7O 7.0 FTSY_ECOLI
22 PsiBlast_CBE 82.0049% -99 - C8 -4C7O 3.3 FTSY_ECOLI
16 PsiBlast_PDB 76.8543% -92 - C8 -3E70 7.4 ?
15 PsiBlast_PDB 75.8643% -95 - C8 -3DMD 3.4 ?
58 PsiBlast_CBE 75.7033% -86 - C8 -4C7O 3.2 SRP54_ECOLI
57 PsiBlast_CBE 75.4133% -84 - C8 -4C7O 3.0 SRP54_ECOLI
25 PsiBlast_CBE 75.3143%-100 - C8 -3DMD 2.2 ?
35 PsiBlast_CBE 74.8134% -73 - C8 -2J7P 9.5 SRP54_THEAQ
36 PsiBlast_CBE 74.7734% -77 - C8 -2J7P 9.4 SRP54_THEAQ
40 PsiBlast_CBE 74.5334% -74 - C8 -1OKK 2.4 SRP54_THEAQ
54 PsiBlast_CBE 74.4634% -80 - C8 -1RJ9 9.4 SRP54_THEAQ
42 PsiBlast_CBE 73.8634% -81 - C8 -2NG1 6.3 SRP54_THEAQ
51 PsiBlast_CBE 73.4634% -73 - C8 -1JPJ 7.3 SRP54_THEAQ
47 PsiBlast_CBE 73.2734% -78 - C8 -1O87 7.2 SRP54_THEAQ
41 PsiBlast_CBE 72.9834% -81 - C8 -1NG1 7.1 SRP54_THEAQ
50 PsiBlast_CBE 72.5234% -80 - C8 -1JPN 7.5 SRP54_THEAQ
48 PsiBlast_CBE 72.3634% -78 - C8 -1O87 7.2 SRP54_THEAQ
49 PsiBlast_CBE 72.0234% -78 - C8 -1JPN 6.5 SRP54_THEAQ
28 PsiBlast_CBE 71.6935% -96 - C8 -3DM5 7.0 SRP54_PYRFU
29 PsiBlast_CBE 71.0735% -93 - C8 -3DM5 7.5 SRP54_PYRFU