Study : jhp_0711 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C3_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C3_S1
Complex: TYR_E_5(1X8X) / Model_10(1X8X/A) = [3.1] Download7320.0030.23MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN
Complex: AZY_A_2(2YXN) / Model_19(2YXN/A) = [3.3] Download650.4320.00MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN
Complex: ATP_A_5(1H3E) / Model_2(1H3E/A) = [5.0] Download845.6429.88MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN
Complex: TYA_C_3(3TS1) / Model_8(3TS1/A) = [5.9] Download1170.8334.51MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN
Complex: YSA_C_3(1VBN) / Model_17(1VBN/A) = [7.5] Download1411.5436.62MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN
Consensus
[pKd Mean = 4.96]
-2279
(s=2533)
30
(s=5)
MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN