@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0729: (2015-12-17 )
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIMYREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BB2_B_9(3M6P)
DEF1B_ARATH
[Raw transfer]




BB2_A_3(4E9B)
?
[Raw transfer]




BB2_A_2(3PN4)
DEF1B_ARATH
[Raw transfer]




BB2_A_5(3M6R)
DEF1B_ARATH
[Raw transfer]




BB2_A_3(1LRY)
DEF_PSEAE
[Raw transfer]




BB2_B_11(3M6R)
DEF1B_ARATH
[Raw transfer]




GNR_B_6(1S17)
DEF_PSEAE
[Raw transfer]




BB2_A_3(3M6P)
DEF1B_ARATH
[Raw transfer]




2BB_B_7(3K6L)
DEF_ECOLI
[Raw transfer]




BB1_A_7(1G27)
DEF_ECOLI
[Raw transfer]




BB2_C_16(3M6R)
DEF1B_ARATH
[Raw transfer]




BB1_C_9(1G27)
DEF_ECOLI
[Raw transfer]




2BB_A_5(3K6L)
DEF_ECOLI
[Raw transfer]




GNR_A_5(1S17)
DEF_PSEAE
[Raw transfer]




BB1_B_8(1G27)
DEF_ECOLI
[Raw transfer]




BB2_D_22(3M6R)
DEF1B_ARATH
[Raw transfer]




BB2_A_7(1G2A)
DEF_ECOLI
[Raw transfer]




BB2_A_2(3M6Q)
DEF1B_ARATH
[Raw transfer]




BB2_A_5(1IX1)
DEF_PSEAE
[Raw transfer]




BB2_A_3(1WS1)
DEF1_BACCR
[Raw transfer]




Y13_A_3(2EW6)
?
[Raw transfer]




BB2_B_7(1IX1)
DEF_PSEAE
[Raw transfer]




QAP_A_3(4E9A)
?
[Raw transfer]




BB2_C_11(1LRU)
DEF_ECOLI
[Raw transfer]




GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]




SB7_A_7(2AI8)
DEF_ECOLI
[Raw transfer]




Y12_A_3(2EW5)
?
[Raw transfer]




BB2_A_9(1LRU)
DEF_ECOLI
[Raw transfer]




SB7_B_8(2AI8)
DEF_ECOLI
[Raw transfer]




BB2_B_8(1G2A)
DEF_ECOLI
[Raw transfer]




BB2_B_10(1LRU)
DEF_ECOLI
[Raw transfer]




GOL_A_5(1N5N)
DEF_PSEAE
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




SB7_C_9(2AI8)
DEF_ECOLI
[Raw transfer]




GOL_B_6(1N5N)
DEF_PSEAE
[Raw transfer]




FMT_A_3(1XEM)
DEF_ECOLI
[Raw transfer]




2PE_C_11(1BS4)
DEF_ECOLI
[Raw transfer]




BB2_C_9(1G2A)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSK)
DEF_ECOLI
[Raw transfer]




2PE_C_11(1BSZ)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSJ)
DEF_ECOLI
[Raw transfer]




FMT_A_3(2W3U)
DEF_ECOLI
[Raw transfer]




2PE_C_11(1ICJ)
DEF_ECOLI
[Raw transfer]




BB4_A_8(3O3J)
DEF1B_ARATH
[Raw transfer]




2PE_A_9(1BS4)
DEF_ECOLI
[Raw transfer]




2PE_A_9(1ICJ)
DEF_ECOLI
[Raw transfer]




2PE_B_10(1BSZ)
DEF_ECOLI
[Raw transfer]




2PE_A_9(1BSZ)
DEF_ECOLI
[Raw transfer]




FMT_A_5(1XEN)
DEF_ECOLI
[Raw transfer]




2PE_B_10(1ICJ)
DEF_ECOLI
[Raw transfer]




2PE_B_10(1BS4)
DEF_ECOLI
[Raw transfer]




BME_A_4(4AL3)
DEF_ECOLI
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




H2S_A_5(4AL2)
DEF_ECOLI
[Raw transfer]




H2S_B_7(4AL2)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS6)
DEF_ECOLI
[Raw transfer]

-

H2S_A_3(4AZ4)
?
[Raw transfer]




CHAIN_F_6(1BS6)
DEF_ECOLI
[Raw transfer]

-

H2S_C_9(4AL2)
DEF_ECOLI
[Raw transfer]




CHAIN_E_5(1BS6)
DEF_ECOLI
[Raw transfer]

-

CHAIN_F_6(1BS8)
DEF_ECOLI
[Raw transfer]

-

CHAIN_E_5(1BS8)
DEF_ECOLI
[Raw transfer]

-

CHAIN_D_4(1BS8)
DEF_ECOLI
[Raw transfer]

-

2 PsiBlast_PDB 96.8995%-101 - C2 -2EW6 6.5 ?
5 PsiBlast_PDB 95.9895%-106 - C2 -4E9B 7.1 ?
3 PsiBlast_PDB 95.8195%-105 - C2 -2EW7 - ? -
4 PsiBlast_PDB 95.6795%-103 - C2 -4E9A 6.9 ?
1 PsiBlast_PDB 95.3595%-104 - C2 -2EW5 7.2 ?
9 PsiBlast_PDB 85.3146% -92 - C2 -1N5N 2.6 DEF_PSEAE
10 PsiBlast_PDB 84.4646% -91 - C2 -1S17 4.5 DEF_PSEAE
23 PsiBlast_CBE 84.3846% -97 - C2 -1N5N 2.1 DEF_PSEAE
6 PsiBlast_PDB 83.4346% -90 - C2 -1IX1 7.0 DEF_PSEAE
21 PsiBlast_CBE 83.4246% -90 - C2 -1IX1 6.9 DEF_PSEAE
22 PsiBlast_CBE 83.0546% -93 - C2 -1S17 4.7 DEF_PSEAE
102 HHSearch 82.6445% -90 - C2 -1N5N - DEF_PSEAE -
11 PsiBlast_PDB 82.5245% -97 - C2 -1LRY 7.0 DEF_PSEAE
52 PsiBlast_CBE 81.1739% -98 - C2 -1BS7 - DEF_ECOLI -
124 Fugue 80.8139% -94 - C2 -1BS4 - DEF_ECOLI -
51 PsiBlast_CBE 80.3539% -99 - C2 -1BS7 - DEF_ECOLI -
18 PsiBlast_PDB 80.2339% -98 - C2 -1BS7 - DEF_ECOLI -
15 PsiBlast_PDB 80.1939% -97 - C2 -1BS4 5.6 DEF_ECOLI
14 PsiBlast_PDB 79.9839% -96 - C2 -1ICJ 5.2 DEF_ECOLI
20 PsiBlast_PDB 79.8439% -96 - C2 -1BSZ 5.2 DEF_ECOLI
46 PsiBlast_CBE 79.7439% -97 - C2 -1BSZ 5.1 DEF_ECOLI
57 PsiBlast_CBE 79.4739% -97 - C2 -1BS4 5.1 DEF_ECOLI
45 PsiBlast_CBE 79.4639% -94 - C2 -1BSZ 5.0 DEF_ECOLI
38 PsiBlast_CBE 79.4539% -97 - C2 -1ICJ 4.4 DEF_ECOLI
37 PsiBlast_CBE 79.3839% -96 - C2 -1ICJ 5.6 DEF_ECOLI
54 PsiBlast_CBE 79.2339% -97 - C2 -1BS6 4.1 DEF_ECOLI
47 PsiBlast_CBE 79.2239% -99 - C2 -1BSK 6.8 DEF_ECOLI
58 PsiBlast_CBE 79.1739%-100 - C2 -1BS4 4.6 DEF_ECOLI
30 PsiBlast_CBE 78.8539% -95 - C2 -2AI8 4.1 DEF_ECOLI
28 PsiBlast_CBE 78.8139% -96 - C2 -2AI8 4.1 DEF_ECOLI
36 PsiBlast_CBE 78.5739% -95 - C2 -1LRU 6.2 DEF_ECOLI
25 PsiBlast_CBE 78.5540% -96 - C2 -3K6L 5.1 DEF_ECOLI
35 PsiBlast_CBE 78.4939% -95 - C2 -1LRU 7.2 DEF_ECOLI
44 PsiBlast_CBE 78.4339% -94 - C2 -1G27 5.7 DEF_ECOLI
53 PsiBlast_CBE 78.4239% -99 - C2 -1BS6 4.0 DEF_ECOLI
50 PsiBlast_CBE 78.4039% -97 - C2 -1BS8 4.1 DEF_ECOLI
49 PsiBlast_CBE 78.3639% -97 - C2 -1BS8 3.7 DEF_ECOLI
41 PsiBlast_CBE 78.3439% -99 - C2 -1G2A 6.1 DEF_ECOLI
27 PsiBlast_CBE 78.3439%-103 - C2 -4AL2 2.8 DEF_ECOLI
93 PsiBlast_CBE 78.2738% -88 - C2 -3M6R 6.4 DEF1B_ARATH
43 PsiBlast_CBE 78.2739% -96 - C2 -1G27 4.8 DEF_ECOLI
19 PsiBlast_PDB 78.2139% -96 - C2 -1BS8 3.8 DEF_ECOLI
60 PsiBlast_CBE 78.1139% -99 - C2 -2W3T 2.4 DEF_ECOLI
12 PsiBlast_PDB 77.9640% -99 - C2 -3K6L 5.8 DEF_ECOLI
13 PsiBlast_PDB 77.8439%-100 - C2 -4AL2 2.8 DEF_ECOLI
91 PsiBlast_CBE 77.7938% -87 - C2 -3M6R 6.5 DEF1B_ARATH
31 PsiBlast_CBE 77.7639% -88 - C2 -1XEO 3.5 DEF_ECOLI
48 PsiBlast_CBE 77.7339% -96 - C2 -1BSJ 6.4 DEF_ECOLI
8 PsiBlast_PDB 77.5547%-109 - C2 -1WS1 7.2 DEF1_BACCR
33 PsiBlast_CBE 77.5439% -91 - C2 -1XEM 3.6 DEF_ECOLI
34 PsiBlast_CBE 77.5239%-103 - C2 -1LRU 5.7 DEF_ECOLI
59 PsiBlast_CBE 77.4239% -92 - C2 -2W3U 3.4 DEF_ECOLI
42 PsiBlast_CBE 77.3939% -96 - C2 -1G27 5.0 DEF_ECOLI
39 PsiBlast_CBE 77.3839% -94 - C2 -1G2A 7.0 DEF_ECOLI
32 PsiBlast_CBE 77.3639% -91 - C2 -1XEN 3.0 DEF_ECOLI
29 PsiBlast_CBE 77.3339% -96 - C2 -2AI8 4.0 DEF_ECOLI
26 PsiBlast_CBE 77.2539%-101 - C2 -4AL2 2.8 DEF_ECOLI
75 PsiBlast_CBE 77.2239% -98 - C2 -4AL3 1.9 DEF_ECOLI
17 PsiBlast_PDB 77.2239%-103 - C2 -1BS6 4.0 DEF_ECOLI
90 PsiBlast_CBE 77.1338% -89 - C2 -3M6R 6.2 DEF1B_ARATH
81 PsiBlast_CBE 76.8838% -89 - C2 -3M6P 6.5 DEF1B_ARATH
87 PsiBlast_CBE 76.8538% -98 - C2 -3M6Q 5.8 DEF1B_ARATH
64 PsiBlast_CBE 76.2939% -92 - C2 -4AZ4 2.9 ?
92 PsiBlast_CBE 76.1838% -89 - C2 -3M6R 5.8 DEF1B_ARATH
82 PsiBlast_CBE 76.0938% -91 - C2 -3M6P 6.8 DEF1B_ARATH
40 PsiBlast_CBE 76.0639% -94 - C2 -1G2A 6.4 DEF_ECOLI
76 PsiBlast_CBE 75.7338% -88 - C2 -3PN4 6.6 DEF1B_ARATH
80 PsiBlast_CBE 74.5738% -89 - C2 -3O3J 4.3 DEF1B_ARATH