@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0764: (2015-12-18 )
MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAIQRVSKKGSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNSKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGLFIFVGYDVNNAVLKQEDNSMLCECDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(2Q0L)
TRXB_HELPY
[Raw transfer]




NDP_A_3(4A65)
?
[Raw transfer]




NAP_A_4(2Q0K)
TRXB_HELPY
[Raw transfer]




NDP_A_3(4A5L)
?
[Raw transfer]




FAD_B_4(2Q7V)
?
[Raw transfer]




FAD_A_3(3R9U)
?
[Raw transfer]




FAD_A_3(2Q7V)
?
[Raw transfer]




FAD_B_5(2Q0L)
TRXB_HELPY
[Raw transfer]




FAD_C_6(3ISH)
TRXB_HELPY
[Raw transfer]




FAD_B_5(2Q0K)
TRXB_HELPY
[Raw transfer]




FAD_A_3(2Q0L)
TRXB_HELPY
[Raw transfer]




FAD_B_5(3ISH)
TRXB_HELPY
[Raw transfer]




FLC_B_7(2WHD)
?
[Raw transfer]




FLC_A_4(2WHD)
?
[Raw transfer]




23 PsiBlast_CBE 99.3198%-133 - C3 -2Q0L 13.7 TRXB_HELPY
68 HHSearch 98.7298%-131 - C3 -2Q0L 13.5 TRXB_HELPY
2 PsiBlast_PDB 98.7298%-131 - C3 -2Q0L 9.5 TRXB_HELPY
1 PsiBlast_PDB 98.6698%-134 - C3 -2Q0K 8.5 TRXB_HELPY
3 PsiBlast_PDB 98.2698%-131 - C3 -3ISH - TRXB_HELPY -
24 PsiBlast_CBE 97.6098%-130 - C3 -2Q0K 13.7 TRXB_HELPY
22 PsiBlast_CBE 97.3498%-129 - C3 -3ISH 13.5 TRXB_HELPY
21 PsiBlast_CBE 96.8698%-128 - C3 -3ISH 13.0 TRXB_HELPY
69 HHSearch 80.7564%-121 - C3 -3R9U 12.1 ?
4 PsiBlast_PDB 79.4462%-122 - C3 -3R9U - ? -
73 HHSearch 67.8742%-107 - C3 -2Q7V 13.1 ?
70 HHSearch 66.7636%-109 - C3 -3F8D - ? -
40 PsiBlast_CBE 66.2837%-117 - C3 -3F8D - ? -
5 PsiBlast_PDB 65.8643%-107 - C3 -2Q7V - ? -
6 PsiBlast_PDB 65.7437%-104 - C3 -2A87 - TRXB_MYCTU -
36 PsiBlast_CBE 65.5237%-110 - C3 -3F8R - ? -
26 PsiBlast_CBE 65.4537%-103 - C3 -2A87 - TRXB_MYCTU -
58 Fugue 64.9130%-109 - C3 -1HYU - AHPF_SALTY -
25 PsiBlast_CBE 64.9143%-108 - C3 -2Q7V 13.7 ?
34 PsiBlast_CBE 64.6337%-115 - C3 -3F8R - ? -
17 PsiBlast_PDB 60.5435%-103 - C3 -4A65 8.6 ?
54 PsiBlast_CBE 60.3434%-102 - C3 -2WHD 2.5 ?
16 PsiBlast_PDB 60.0335%-102 - C3 -4A5L 8.4 ?
55 PsiBlast_CBE 58.6234%-100 - C3 -2WHD 3.1 ?