@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0768: (2015-12-18 )
MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNIGLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIQTQVKEITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQKRIEYPEANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDALVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISAGADAVKVGIGPGSICTTRIVAGVGMPQVSAIDNCVEVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFMIYQGRQYKSYRGMGSIGAMTKGSSDRYFQEGVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYYG

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_8(4X3Z)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




NAJ_A_4(4QNE)
?
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_A_2(4R7J)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




IMP_A_4(4AF0)
?
[Raw transfer]




IMP_B_6(4AF0)
?
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




RVP_Y_25(1NF7)
IMDH2_HUMAN
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




XMP_A_3(3TSD)
?
[Raw transfer]




MYD_U_21(1NF7)
IMDH2_HUMAN
[Raw transfer]




CPR_B_13(1NFB)
IMDH2_HUMAN
[Raw transfer]




CPR_A_9(1NFB)
IMDH2_HUMAN
[Raw transfer]




Q21_A_6(4MY8)
?
[Raw transfer]




NAD_Q_17(1NFB)
IMDH2_HUMAN
[Raw transfer]




2F1_C_20(4MZ1)
?
[Raw transfer]




2F1_A_5(4MZ1)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




39H_A_6(4QM1)
?
[Raw transfer]




NAD_U_21(1NFB)
IMDH2_HUMAN
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




39H_C_9(4QM1)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




2F1_B_12(4MZ1)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




39H_B_8(4QM1)
?
[Raw transfer]




39H_C_10(4QM1)
?
[Raw transfer]




6 PsiBlast_PDB 88.7252% -90 - C2 -4FXS 6.7 ?
2 PsiBlast_PDB 86.6459% -81 - C2 -3TSB - ? -
106 HHSearch 85.6856% -84 - C2 -1ZFJ 6.2 IMDH_STRPY
8 PsiBlast_PDB 85.6754% -96 - C2 -4DQW - ? -
5 PsiBlast_PDB 85.2754% -85 - C2 -1ZFJ 6.2 IMDH_STRPY
21 PsiBlast_CBE 84.8154% -99 - C2 -4DQW - ? -
105 HHSearch 84.6259% -93 - C2 -3USB 4.6 ?
10 PsiBlast_PDB 84.4854% -93 - C2 -5AHN 4.9 ?
9 PsiBlast_PDB 84.3754% -90 - C2 -3ZFH - ? -
4 PsiBlast_PDB 83.7257% -91 - C2 -3USB 4.6 ?
3 PsiBlast_PDB 83.6859% -87 - C2 -3TSD 6.0 ?
1 PsiBlast_PDB 83.6659% -86 - C2 -1VRD - ? -
109 HHSearch 83.3559% -87 - C2 -1VRD - ? -
7 PsiBlast_PDB 83.2254% -92 - C2 -4AVF - ? -
108 HHSearch 80.7749% -84 - C2 -2CU0 6.8 IMDH_PYRHO
11 PsiBlast_PDB 80.3449% -84 - C2 -2CU0 6.8 IMDH_PYRHO
87 PsiBlast_CBE 79.2040% -87 - C2 -4AF0 6.8 ?
20 PsiBlast_PDB 79.1541% -88 - C2 -4AF0 6.7 ?
111 HHSearch 78.0055% -92 - C2 -1EEP - IMDH_BORBU -
112 HHSearch 77.8059%-103 - C2 -3FFS - IMDH_CRYPV -
90 PsiBlast_CBE 76.1240% -84 - C2 -1NF7 5.0 IMDH2_HUMAN
107 HHSearch 76.0635% -79 - C2 -1ME8 6.6 IMDH_TRIFO
91 PsiBlast_CBE 76.0140% -83 - C2 -1NF7 4.6 IMDH2_HUMAN
89 PsiBlast_CBE 75.0240% -91 - C2 -1NFB 7.4 IMDH2_HUMAN
88 PsiBlast_CBE 74.7440% -91 - C2 -1NFB 4.9 IMDH2_HUMAN
26 PsiBlast_CBE 73.1760% -81 - C2 -4MZ1 4.5 ?
13 PsiBlast_PDB 72.7360% -77 - C2 -4MZ1 4.7 ?
25 PsiBlast_CBE 72.7260% -79 - C2 -4MZ1 4.8 ?
14 PsiBlast_PDB 72.0760% -76 - C2 -4R7J 6.7 ?
84 PsiBlast_CBE 66.5259% -94 - C2 -4IX2 5.2 ?
82 PsiBlast_CBE 66.3159% -97 - C2 -4IX2 6.1 ?
81 PsiBlast_CBE 65.9259% -98 - C2 -4IX2 5.6 ?
86 PsiBlast_CBE 65.9059% -96 - C2 -4FO4 6.0 ?
77 PsiBlast_CBE 65.6659% -94 - C2 -4X3Z 6.0 ?
85 PsiBlast_CBE 65.5259% -93 - C2 -4FO4 6.3 ?
79 PsiBlast_CBE 65.5159% -91 - C2 -4QNE 6.1 ?
83 PsiBlast_CBE 65.4959% -91 - C2 -4IX2 4.1 ?
76 PsiBlast_CBE 65.3359% -93 - C2 -4X3Z 5.4 ?
80 PsiBlast_CBE 65.0959% -89 - C2 -4QNE 5.8 ?
54 PsiBlast_CBE 64.8261% -97 - C2 -4MYA 5.2 ?
55 PsiBlast_CBE 64.5861% -94 - C2 -4MYA 5.1 ?
78 PsiBlast_CBE 64.2559%-105 - C2 -4QQ3 6.9 ?
44 PsiBlast_CBE 64.2161% -97 - C2 -4QM1 5.1 ?
45 PsiBlast_CBE 63.7361% -96 - C2 -4QM1 4.7 ?
66 PsiBlast_CBE 63.0161% -97 - C2 -4MY8 5.6 ?
42 PsiBlast_CBE 62.8661% -96 - C2 -4QM1 4.7 ?
65 PsiBlast_CBE 62.7961%-101 - C2 -4MY8 5.4 ?
43 PsiBlast_CBE 62.2561% -96 - C2 -4QM1 4.8 ?
67 PsiBlast_CBE 62.0661% -95 - C2 -4MY8 5.4 ?