@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0790: (2015-12-18 )
MKVFDYEDVQLIPNKCIVNSRSECDTTVILGKHAFKMPIVPANMQTIINESIAEFLAENGYFYIMHRFNGSARIPFVKKMKERQLISSISVGVKKEECLFVEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIENGIAYKEYFGSASEFQKGEKKNIEGKKIWIQHKGSLKNTLIEMHQDLQSSISYAGGRDLEAIRKVDYVIVKNSIFNGDTI

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_A_13(2A7R)
GMPR2_HUMAN
[Raw transfer]



5GP_A_2(2A1Y)
GUAC_BACAN
[Raw transfer]



XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]



5GP_D_12(2BWG)
GMPR1_HUMAN
[Raw transfer]



IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]



IMP_B_6(4IX2)
?
[Raw transfer]



XMP_A_2(4QQ3)
?
[Raw transfer]



RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]



XMP_B_4(3TSD)
?
[Raw transfer]



XMP_A_3(3TSD)
?
[Raw transfer]



IMP_A_3(3USB)
?
[Raw transfer]



IMP_A_3(3USB)
?
[Raw transfer]
1 PsiBlast_PDB 97.3279%-112 - C1 -2A1Y 5.9 GUAC_BACAN
54 PsiBlast_CBE 72.6437% -90 - C1 -4Q33 - ? -
32 PsiBlast_CBE 72.0436% -90 - C1 -4MY9 - ? -
6 PsiBlast_PDB 72.0036% -90 - C1 -4MYX - ? -
30 PsiBlast_CBE 71.9936% -90 - C1 -4MYX - ? -
23 PsiBlast_CBE 71.8936% -90 - C1 -4QM1 - ? -
3 PsiBlast_PDB 71.8936% -91 - C1 -4MY1 - ? -
28 PsiBlast_CBE 71.7736% -92 - C1 -4MYX - ? -
4 PsiBlast_PDB 71.6036% -90 - C1 -4MYA - ? -
57 PsiBlast_CBE 71.5537% -90 - C1 -4Q33 - ? -
36 PsiBlast_CBE 71.2436% -88 - C1 -4MY9 - ? -
60 PsiBlast_CBE 71.1037% -88 - C1 -4Q32 - ? -
31 PsiBlast_CBE 71.0736% -90 - C1 -4MYA - ? -
58 PsiBlast_CBE 70.9437% -88 - C1 -4Q33 - ? -
38 PsiBlast_CBE 70.7636% -90 - C1 -4MY9 - ? -
35 PsiBlast_CBE 70.6236% -88 - C1 -4MY9 - ? -
61 PsiBlast_CBE 70.5037% -86 - C1 -4Q32 - ? -
48 PsiBlast_CBE 70.4736% -90 - C1 -4MY1 - ? -
25 PsiBlast_CBE 70.4136% -90 - C1 -4MYX - ? -
17 PsiBlast_PDB 70.3235% -93 - C1 -3R2G - ? -
121 HHSearch 69.4834%-101 - C1 -3USB 4.3 ?
14 PsiBlast_PDB 69.2132% -78 - C1 -2A7R 6.5 GMPR2_HUMAN
124 HHSearch 69.0234% -86 - C1 -1ZFJ 5.3 IMDH_STRPY
98 PsiBlast_CBE 64.9733%-101 - C1 -4QQ3 6.5 ?
79 PsiBlast_CBE 64.9231% -77 - C1 -2BWG 6.7 GMPR1_HUMAN
103 PsiBlast_CBE 64.0733% -93 - C1 -4IX2 4.6 ?
127 HHSearch 60.9332% -82 - C1 -2CU0 5.9 IMDH_PYRHO
62 PsiBlast_CBE 55.9539% -91 - C1 -3TSD 5.3 ?
13 PsiBlast_PDB 54.6639% -90 - C1 -3TSD 4.9 ?
18 PsiBlast_PDB 53.2139% -88 - C1 -3USB 3.9 ?