@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0809: (2015-12-18 )
MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEVRKYDPDSNQRDLFDAIAGGDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLYDTIGGSLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEKHQKMMKDMHAKDMHHMKKKK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_B_5(1QWL)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_B_5(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_A_3(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_2(3HB6)
CATA_PROMI
[Raw transfer]




HEM_A_2(1HBZ)
CATA_MICLU
[Raw transfer]




HEM_A_2(1GWH)
CATA_MICLU
[Raw transfer]




HEM_A_2(1GWE)
CATA_MICLU
[Raw transfer]




HEM_A_2(1GWE)
CATA_MICLU
[Raw transfer]




2 PsiBlast_PDB 98.9897% -62 - C6 -1QWM 13.0 CATA_HELPY
22 PsiBlast_CBE 98.8597% -58 - C6 -1QWL 12.9 CATA_HELPY
21 PsiBlast_CBE 98.7997% -62 - C6 -1QWM 13.0 CATA_HELPY
111 HHSearch 98.6897% -60 - C6 -1QWL 13.0 CATA_HELPY
1 PsiBlast_PDB 98.6897% -60 - C6 -1QWL 13.0 CATA_HELPY
11 PsiBlast_PDB 84.8553% -52 - C6 -3NWL - CATA_BOVIN -
3 PsiBlast_PDB 84.7059% -51 - C6 -3HB6 13.0 CATA_PROMI
44 PsiBlast_CBE 84.4853% -50 - C6 -3NWL - CATA_BOVIN -
19 PsiBlast_PDB 84.1852% -52 - C6 -3J7B - CATA_BOVIN -
66 PsiBlast_CBE 84.0052% -51 - C6 -3J7B - CATA_BOVIN -
47 PsiBlast_CBE 83.8653% -51 - C6 -3J7U - CATA_BOVIN -
65 PsiBlast_CBE 83.8452% -53 - C6 -3J7B - CATA_BOVIN -
43 PsiBlast_CBE 83.7853% -51 - C6 -3NWL - CATA_BOVIN -
42 PsiBlast_CBE 83.7653% -50 - C6 -3NWL - CATA_BOVIN -
74 PsiBlast_CBE 83.7352% -50 - C6 -3RGP - CATA_BOVIN -
114 HHSearch 83.6954% -52 * C6 *1DGF - CATA_HUMAN -
67 PsiBlast_CBE 83.6552% -49 - C6 -3J7B - CATA_BOVIN -
73 PsiBlast_CBE 83.6452% -50 - C6 -3RGP - CATA_BOVIN -
45 PsiBlast_CBE 83.6053% -47 - C6 -3J7U - CATA_BOVIN -
78 PsiBlast_CBE 83.5352% -50 - C6 -3RE8 - CATA_BOVIN -
48 PsiBlast_CBE 83.4053% -50 - C6 -8CAT 12.2 CATA_BOVIN
12 PsiBlast_PDB 83.3453% -51 - C6 -7CAT 11.9 CATA_BOVIN
49 PsiBlast_CBE 83.1453% -51 - C6 -7CAT 11.9 CATA_BOVIN
13 PsiBlast_PDB 82.5353% -48 - C6 -8CAT 11.8 CATA_BOVIN
91 PsiBlast_CBE 79.9745% -46 - C6 -1GWH 12.8 CATA_MICLU
93 PsiBlast_CBE 79.7745% -47 - C6 -1HBZ 12.9 CATA_MICLU
92 PsiBlast_CBE 79.7445% -46 - C6 -1GWE 12.8 CATA_MICLU
112 HHSearch 79.0844% -42 - C6 -1GWE 12.8 CATA_MICLU