@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0865: (2015-12-19 )
MKKILLTNDDGYHAKGIKALEQALENMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNVFTKGYPLKGRKLLNVNVPNCSLQEYKGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLKWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_B_9(4G9O)
SURE_SALTY
[Raw transfer]




WO4_D_20(2E6B)
SURE_THET8
[Raw transfer]




EDO_C_13(4XGP)
?
[Raw transfer]




WO4_B_6(1J9K)
SURE_THEMA
[Raw transfer]




WO4_A_4(1J9K)
SURE_THEMA
[Raw transfer]




WO4_C_17(2E6B)
SURE_THET8
[Raw transfer]




WO4_B_12(2E6B)
SURE_THET8
[Raw transfer]




EDO_A_3(4G9O)
SURE_SALTY
[Raw transfer]




21 PsiBlast_CBE 82.4840% -72 - C10 -2WQK - SURE_AQUAE -
23 PsiBlast_CBE 82.4638% -73 - C10 -4ZG5 - SURE_BRUA1 -
22 PsiBlast_CBE 82.2138% -75 - C10 -4ZG5 - SURE_BRUA1 -
74 HHSearch 82.1841% -75 - C10 -2WQK - SURE_AQUAE -
1 PsiBlast_PDB 82.1740% -73 - C10 -2WQK - SURE_AQUAE -
24 PsiBlast_CBE 81.3338% -78 - C10 -4ZG5 - SURE_BRUA1 -
2 PsiBlast_PDB 80.0438% -75 - C10 -4ZG5 - SURE_BRUA1 -
26 PsiBlast_CBE 77.4136% -58 - C10 -2V4O - SURE_SALTY -
13 PsiBlast_PDB 77.3635% -65 - C10 -4GAD - SURE_SALTY -
15 PsiBlast_PDB 76.9636% -58 - C10 -3TY2 - SURE_COXBU -
59 PsiBlast_CBE 76.8635% -69 - C10 -2E6C - SURE_THET8 -
36 PsiBlast_CBE 76.6135% -62 - C10 -4XGP 2.1 ?
75 HHSearch 76.4136% -60 - C10 -3TY2 - SURE_COXBU -
42 PsiBlast_CBE 76.4035% -64 - C10 -4XER - ? -
4 PsiBlast_PDB 76.3736% -58 - C10 -2V4N - SURE_SALTY -
5 PsiBlast_PDB 76.3336% -62 - C10 -4G9O 3.1 SURE_SALTY
43 PsiBlast_CBE 76.2235% -62 - C10 -4XER - ? -
39 PsiBlast_CBE 76.0935% -67 - C10 -4XGB - ? -
28 PsiBlast_CBE 75.6636% -63 - C10 -4G9O 3.3 SURE_SALTY
25 PsiBlast_CBE 75.6536% -60 - C10 -2V4O - SURE_SALTY -
64 PsiBlast_CBE 75.0535% -61 - C10 -2E6B 2.8 SURE_THET8
63 PsiBlast_CBE 73.3935% -62 - C10 -2E6B 2.8 SURE_THET8
65 PsiBlast_CBE 72.8735% -62 - C10 -2E6B 2.8 SURE_THET8
46 PsiBlast_CBE 72.1436% -46 - C10 -1J9K 2.8 SURE_THEMA
17 PsiBlast_PDB 71.1536% -47 - C10 -1J9K 2.8 SURE_THEMA