@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0940: (2015-12-19 )
MPTIDFTFCEINPKKGFGGANGNKISLFYNNELYMVKFPPKPSTHKEMSYTNGCFSEYVACHIVNSLGLKVQETLLGTYKNKIVVACKDFTTHQYELVDFLSLKNTMIELEKSGKDTNLNDVLYAIDNQHFIEPKVLKCFFWDMFVADTLLGNFDRHNGNWGFLRASNSKEYQIAPIFDCGSCLYPQADDVVCQKVLSNIDELNARIYNFPQSILKDDNDKKINYYDFLTQTNNKDCLDALLRIYPRIDMNKIHSIIDNTPFMSEIHKEFLHTMLDERKSKIIDVAHTRAIELSLQHKQAHSNPYDNADDLDNSNEYTPTPKRRR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(3AKK)
CTKA_HELPJ
[Raw transfer]



ADP_B_8(3AKK)
CTKA_HELPJ
[Raw transfer]



ANP_B_8(3AKL)
CTKA_HELPJ
[Raw transfer]



ANP_D_13(3AKL)
CTKA_HELPJ
[Raw transfer]



ANP_A_5(3AKL)
CTKA_HELPJ
[Raw transfer]



ADP_D_12(3AKK)
CTKA_HELPJ
[Raw transfer]



ADP_C_11(3AKL)
CTKA_HELPJ
[Raw transfer]



ADP_C_10(3AKK)
CTKA_HELPJ
[Raw transfer]
10 PsiBlast_CBE 98.77100%-128 - C5 -3AKL 6.5 CTKA_HELPJ
3 PsiBlast_PDB 98.69100%-127 - C5 -3AKL 6.7 CTKA_HELPJ
13 PsiBlast_CBE 98.52100%-129 - C5 -3AKK 6.0 CTKA_HELPJ
8 PsiBlast_CBE 98.40100%-129 - C5 -3AKL 5.9 CTKA_HELPJ
2 PsiBlast_PDB 98.27100%-125 - C5 -3AKK 6.1 CTKA_HELPJ
11 PsiBlast_CBE 97.88100%-130 - C5 -3AKK 6.2 CTKA_HELPJ
9 PsiBlast_CBE 97.73100%-127 - C5 -3AKL 5.3 CTKA_HELPJ
12 PsiBlast_CBE 97.50100%-122 - C5 -3AKK 5.9 CTKA_HELPJ
1 PsiBlast_PDB 96.24100%-131 - C5 -3AKJ - CTKA_HELPJ -
14 HHSearch 95.8899%-131 - C5 -3AKJ - CTKA_HELPJ -
24 Fugue 94.7097%-121 - C5 -3AKJ - CTKA_HELPJ -
30 Fugue 40.4214% -24 - C5 -3DLZ - -
32 Fugue 40.2019% -39 - C2 -4LXU - ? -
27 Fugue 35.3718% -30 * C4 *2EYU - ? -
29 Fugue 33.1616% -8 - C4 -4M16 - ? -
33 Fugue 31.1213% -13 - C3 -4DNH - ? -
16 HHSearch 30.8113% -48 - C5 -1CJA - AFK_PHYPO -
31 Fugue 29.1216% -28 * C2 *1CJD - CAPSD_BPPRD -
19 HHSearch 28.7327% -10 - C5 -2X6H - ? -
25 Fugue 27.6532% 108 - C5 -2JTW - -