@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0978: (2015-12-19 )
MHTLIERLEKVTNSKELEEARLNALGKKGVFADKFNQLKNLNGEEKNAFAKEIHHYKQAFEKAFELKKKAIMELELEERLKKEKIDVSLFNAIKTSSSHPLNYTKNKIIEFFTPLGYKLEIGSLVEDDFHNFSALNLPPYHPARDMQDTFYFKDHKLLRTHTSPVQIHTMQEQTPPIKMICLGETFRCDYDLTHTPMFHQIEGLVVDQKGNIRFTHLKGVIEDFLHYFFGGVKLRWRSSFFPFTEPSAEVDISCVFCKQEGCRVCSHTGWLEVLGCGMVNNAVFEAIGYENVSGFAFGMGIERLAMLTCQINDLRSFFETDLRVLESF

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]




FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]




PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]




PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]




200_A_5(2AKW)
SYFA_THETH
[Raw transfer]




GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]




GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]




DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]




MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]




25 PsiBlast_CBE 94.6346%-100 - C3 -3PCO - ? -
29 HHSearch 91.2753%-124 - C3 -2RHQ 7.3 SYFA_STAHJ
26 PsiBlast_CBE 91.1850%-121 - C3 -2RHS - SYFA_STAHJ -
47 Fugue 90.6641% -97 - C3 -1EIY - SYFA_THET8 -
13 PsiBlast_PDB 90.2039%-100 - C3 -2IY5 - SYFA_THETH -
7 PsiBlast_PDB 90.1550%-120 - C3 -2RHQ 7.3 SYFA_STAHJ
22 PsiBlast_CBE 89.5649%-134 - C3 -4P74 - SYFA_PSEAE -
1 PsiBlast_PDB 89.5549%-130 - C3 -4P71 - SYFA_PSEAE -
8 PsiBlast_PDB 89.3250%-114 - C3 -2RHS - SYFA_STAHJ -
21 PsiBlast_CBE 89.3149%-134 - C3 -4P75 - SYFA_PSEAE -
23 PsiBlast_CBE 89.2649%-132 - C3 -4P73 - SYFA_PSEAE -
24 PsiBlast_CBE 89.2049%-131 - C3 -4P72 - SYFA_PSEAE -
4 PsiBlast_PDB 89.1449%-128 - C3 -4P74 - SYFA_PSEAE -
10 PsiBlast_PDB 89.0239% -97 - C3 -1EIY - SYFA_THET8 -
3 PsiBlast_PDB 88.9449%-127 - C3 -4P73 - SYFA_PSEAE -
5 PsiBlast_PDB 88.4449%-130 - C3 -4P75 - SYFA_PSEAE -
2 PsiBlast_PDB 88.0949%-130 - C3 -4P72 - SYFA_PSEAE -
51 Fugue 86.2332%-102 - C3 -3CMQ 7.4 SYFM_HUMAN
27 HHSearch 86.0147%-119 - C3 -3PCO - ? -
6 PsiBlast_PDB 85.4746%-123 - C3 -3PCO - ? -
16 PsiBlast_PDB 85.3339%-115 - C3 -4TVA 4.6 SYFA_THETH
18 PsiBlast_PDB 85.2739%-117 - C3 -2ALY 9.8 SYFA_THETH
12 PsiBlast_PDB 85.0639%-115 - C3 -1JJC 9.8 SYFA_THET8
9 PsiBlast_PDB 84.8739%-116 - C3 -1B7Y 9.0 SYFA_THETH
17 PsiBlast_PDB 84.7539%-118 - C3 -2AKW 4.4 SYFA_THETH
28 HHSearch 84.6641%-121 - C3 -1B7Y 8.9 SYFA_THETH
15 PsiBlast_PDB 84.5839%-117 - C3 -3TEH 3.1 SYFA_THETH
19 PsiBlast_PDB 84.4739%-123 - C3 -2AMC 3.8 SYFA_THETH
14 PsiBlast_PDB 84.4639%-114 - C3 -3HFZ 4.3 SYFA_THET8
11 PsiBlast_PDB 84.4039%-111 - C3 -1B70 4.0 SYFA_THETH
31 HHSearch 81.8033%-107 - C3 -3CMQ 7.4 SYFM_HUMAN