@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1017: (2015-12-20 )
MNSIKNHLMCEEIHKRFNLHPKVREAMESIEREVFVPAPFKHFAYTLNALSMQAQQYISSPLTVAKMTQYLEIDHVDSVLEIGCGSGYQAAVLSQIFRRVFSIERIESLYIEARLRLKTLGLDNVHVKFADGNKGWERYAPYDRILFSACAKNIPQALIDQLEEGGILVAPIQENNEQVIKRFVKQNNALRVQKVLEKCLFVPVVDGVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_5(3LBF)
PIMT_ECOLI
[Raw transfer]



SAH_B_10(3LBF)
PIMT_ECOLI
[Raw transfer]



SAH_A_5(3LBF)
PIMT_ECOLI
[Raw transfer]



SAH_C_13(3LBF)
PIMT_ECOLI
[Raw transfer]



SAH_D_14(3LBF)
PIMT_ECOLI
[Raw transfer]



SAH_A_2(4O29)
PIMT_PYRAE
[Raw transfer]
23 PsiBlast_CBE 88.2043%-108 - C1 -3LBF 7.6 PIMT_ECOLI
21 PsiBlast_CBE 87.9043%-105 * C1 *3LBF 7.0 PIMT_ECOLI
31 HHSearch 87.4740% -95 - C1 -3LBF 8.2 PIMT_ECOLI
22 PsiBlast_CBE 87.2843%-110 - C1 -3LBF 8.3 PIMT_ECOLI
1 PsiBlast_PDB 86.6743%-100 - C1 -3LBF 8.2 PIMT_ECOLI
32 HHSearch 85.2336% -99 - C1 -2YXE - PIMT_METJA -
2 PsiBlast_PDB 85.1536%-105 - C1 -4O29 6.6 PIMT_PYRAE
30 HHSearch 80.2131% -92 - C1 -1JG1 - PIMT_PYRFU -
3 PsiBlast_PDB 77.0341%-110 - C1 -2YXE - PIMT_METJA -
12 PsiBlast_PDB 76.4426%-101 - C1 -1R18 - PIMT_DROME -
35 HHSearch 76.3326% -90 - C1 -1R18 - PIMT_DROME -
34 HHSearch 75.6327% -90 - C1 -1I1N - PIMT_HUMAN -
10 PsiBlast_PDB 73.2628% -99 - C1 -1I1N - PIMT_HUMAN -
11 PsiBlast_PDB 71.2228% -95 - C1 -1KR5 - PIMT_HUMAN -
9 PsiBlast_PDB 69.1428%-109 - C1 -1DL5 - PIMT_THEMA -
7 PsiBlast_PDB 66.9840% -99 - C1 -1JG1 - PIMT_PYRFU -
5 PsiBlast_PDB 66.3240% -96 - C1 -1JG3 - PIMT_PYRFU -
37 HHSearch 66.2628% -95 - C1 -1DL5 - PIMT_THEMA -
6 PsiBlast_PDB 65.0940% -98 - C1 -1JG2 - PIMT_PYRFU -
33 HHSearch 64.9322% -98 - C1 -2PBF - ? -