@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1020: (2015-12-20 )
MALLFTGACGYIGSHTARVFLEKTKENIIIIDDLSTGFLEHIKALERYYPNRVAFIQANLNETQKLDAFLNKQQLKDPIEAVLHFGAKISVEESMRLPLEYYTNNTLNTLGLVKLCLKHAIKRFIFSSTAVVYGESGSSLSEESPLNPINPYGASKMMSERILLDASKVADFKCVILRYFNVAGACMHNDYTTPYTLGQRTLNATHLIKIACECAVGKRKKMGIFGTNYPTRDGTCIRDYIHVDDLANAHLASYHTLLEKNKSEIYNVGYNQGHSVKEVIEKVKEISNKDFLVEILDKRQGDPASLIANNSKILQNTPFKPLYNNLDTIIKSALSWEEHLLKFQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]



NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]
40 HHSearch 94.6338%-104 - C1 -2C20 - ? -
15 PsiBlast_PDB 91.1534% -98 - C1 -1UDC - GALE_ECOLI -
43 HHSearch 90.8335% -96 - C1 -3ENK - ? -
6 PsiBlast_PDB 90.6934% -96 - C1 -3ENK - ? -
13 PsiBlast_PDB 90.6534% -99 - C1 -1XEL - GALE_ECOLI -
9 PsiBlast_PDB 90.5734% -98 - C1 -1NAH - GALE_ECOLI -
31 PsiBlast_CBE 90.5334%-100 - C1 -2UDP - GALE_ECOLI -
12 PsiBlast_PDB 90.2034% -97 - C1 -1UDB - GALE_ECOLI -
8 PsiBlast_PDB 90.1634%-101 - C1 -1LRJ - GALE_ECOLI -
30 PsiBlast_CBE 89.9034% -94 - C1 -3ENK - ? -
19 PsiBlast_PDB 89.8934% -98 - C1 -1KVR - GALE_ECOLI -
14 PsiBlast_PDB 89.6934% -98 - C1 -2UDP - GALE_ECOLI -
18 PsiBlast_PDB 89.5934% -97 - C1 -1KVQ - GALE_ECOLI -
10 PsiBlast_PDB 89.4934% -99 - C1 -1NAI - GALE_ECOLI -
33 PsiBlast_CBE 89.4634% -96 - C1 -1A9Y - GALE_ECOLI -
16 PsiBlast_PDB 89.0634% -99 - C1 -1LRK - GALE_ECOLI -
34 PsiBlast_CBE 88.9234% -98 - C1 -1A9Z - GALE_ECOLI -
32 PsiBlast_CBE 88.7034% -97 - C1 -1KVU - GALE_ECOLI -
20 PsiBlast_PDB 88.5534% -96 - C1 -1KVT - GALE_ECOLI -
11 PsiBlast_PDB 87.6534% -95 - C1 -1UDA - GALE_ECOLI -
45 HHSearch 86.9134% -94 - C1 -1UDB 9.8 GALE_ECOLI
60 Fugue 85.9133% -90 - C1 -1Z45 10.6 GAL10_YEAST