@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1086: (2015-12-20 )
MHLDRQSLEKAKHLIQSGLIDTIEVGAIKGLQEIHRFLFEGLYEFAGKIRDKNISNFRFANCLYLDLILPRMESMPQNNFNQIIEKYVEMNIAHPFLEGNGRATRIWLDLLLKKELKKIALWDRIDKAAYLSAIKRSPVNDLEIKTLLKKHLSSNINDSLTFIKGITQSYYYEGL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3ZLM)
NMFIC_NEIMB
[Raw transfer]




ANP_A_5(3SE5)
NMFIC_NEIMB
[Raw transfer]




ANP_A_5(3SE5)
NMFIC_NEIMB
[Raw transfer]




ANP_B_8(3SE5)
NMFIC_NEIMB
[Raw transfer]




ANP_C_12(3SE5)
NMFIC_NEIMB
[Raw transfer]




ANP_D_15(3SE5)
NMFIC_NEIMB
[Raw transfer]




ANP_A_2(3S6A)
NMFIC_NEIMB
[Raw transfer]




TLA_A_3(3SHG)
VBHT_BARSR
[Raw transfer]




ATP_A_5(2JK8)
BEPA_BARHE
[Raw transfer]




ACY_A_6(2G03)
NMFIC_NEIMB
[Raw transfer]




ACY_A_5(2G03)
NMFIC_NEIMB
[Raw transfer]




59 HHSearch 94.9794%-108 - C8 -2F6S - ? -
1 PsiBlast_PDB 94.3992%-108 - C8 -2F6S - ? -
2 PsiBlast_PDB 87.6059%-103 - C8 -3S6A 7.9 NMFIC_NEIMB
3 PsiBlast_PDB 87.4759%-101 - C8 -3ZLM 7.2 NMFIC_NEIMB
30 PsiBlast_CBE 86.0558%-112 - C8 -3SN9 - NMFIC_NEIMB -
37 PsiBlast_CBE 85.6961%-113 - C8 -3SE5 9.4 NMFIC_NEIMB
34 PsiBlast_CBE 85.6958%-110 - C8 -3SN9 - NMFIC_NEIMB -
5 PsiBlast_PDB 85.6458% -98 - C8 -2G03 3.0 NMFIC_NEIMB
4 PsiBlast_PDB 85.5358%-111 - C8 -3SN9 - NMFIC_NEIMB -
38 PsiBlast_CBE 85.3561%-112 - C8 -3SE5 9.1 NMFIC_NEIMB
27 PsiBlast_CBE 85.2558%-112 - C8 -3SN9 - NMFIC_NEIMB -
33 PsiBlast_CBE 85.2258%-111 - C8 -3SN9 - NMFIC_NEIMB -
29 PsiBlast_CBE 85.1258%-111 - C8 -3SN9 - NMFIC_NEIMB -
28 PsiBlast_CBE 85.0158%-110 - C8 -3SN9 - NMFIC_NEIMB -
36 PsiBlast_CBE 84.8661%-113 - C8 -3SE5 9.1 NMFIC_NEIMB
35 PsiBlast_CBE 84.8358%-108 - C8 -3SN9 - NMFIC_NEIMB -
31 PsiBlast_CBE 84.7958%-109 - C8 -3SN9 - NMFIC_NEIMB -
60 HHSearch 84.7562%-111 - C8 -3SE5 9.0 NMFIC_NEIMB
21 PsiBlast_CBE 84.6958%-110 - C8 -3SN9 - NMFIC_NEIMB -
32 PsiBlast_CBE 84.4558%-110 - C8 -3SN9 - NMFIC_NEIMB -
6 PsiBlast_PDB 83.9361%-111 - C8 -3SE5 9.0 NMFIC_NEIMB