@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1114: (2015-12-21 )
MKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASARSAGKKIRAFNKDYEILETTHEVFEKEEIDIAFFSAGGSVSEEFAISASKTALVIDNTSFFRLNKDVPLVVPEINAQEIFNAPLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAVSGAGNKGIESLKNELKTALEHLEKDPAIDLNQVLQAGAFAYPIAFNAIAHIDTFKENGYTKEELKMVHETHKIMGVDFPISATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVVVCDDPSHNLYPTPLKASHTDSVFIGRLRKDLFDKKTLHGFCVADQLRVGAATNALKIALHYIKNA

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JN_A_9(4R5H)
?
[Raw transfer]




3JL_A_3(4R4J)
?
[Raw transfer]




11C_A_3(3PWS)
?
[Raw transfer]




NAP_B_11(4R4J)
?
[Raw transfer]




3JL_B_9(4R4J)
?
[Raw transfer]




12T_B_13(3PYX)
?
[Raw transfer]




11C_B_6(3PWS)
?
[Raw transfer]




NAP_B_12(4R3N)
?
[Raw transfer]




NAP_A_5(4R3N)
?
[Raw transfer]




NAP_A_4(4R4J)
?
[Raw transfer]




NAP_A_10(4R5H)
?
[Raw transfer]




NAP_A_6(4R51)
?
[Raw transfer]




3GQ_B_13(4R3N)
?
[Raw transfer]




GOL_A_2(3VOS)
DHAS_MYCTU
[Raw transfer]




4NO_A_3(4R41)
?
[Raw transfer]




3GQ_A_6(4R3N)
?
[Raw transfer]




NAP_B_9(3PYX)
?
[Raw transfer]




NAP_B_9(3PZB)
?
[Raw transfer]




3JM_A_7(4R54)
?
[Raw transfer]




NAP_A_3(3PYX)
?
[Raw transfer]




4NO_B_13(4R41)
?
[Raw transfer]




NAP_A_5(4R54)
?
[Raw transfer]




NAP_A_4(3PZB)
?
[Raw transfer]




NAP_B_15(4R5H)
?
[Raw transfer]




MLA_A_7(1YS4)
DHAS_METJA
[Raw transfer]




NAP_B_15(4R51)
?
[Raw transfer]




NAP_A_3(3Q11)
?
[Raw transfer]




NAP_B_9(4R54)
?
[Raw transfer]




NAP_B_9(3Q11)
?
[Raw transfer]




2RA_B_8(3PZB)
?
[Raw transfer]




NAP_A_4(4R41)
?
[Raw transfer]




2RA_A_3(3PZB)
?
[Raw transfer]




NAP_B_14(4R41)
?
[Raw transfer]




CYS_A_3(3PZR)
DHAS1_VIBCH
[Raw transfer]




A2P_B_7(3PWS)
?
[Raw transfer]




A2P_A_8(4R3W)
?
[Raw transfer]




25A_B_10(3PWK)
?
[Raw transfer]




CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]




A2P_A_5(3PWS)
?
[Raw transfer]




CYS_A_2(3TZ6)
DHAS_MYCTU
[Raw transfer]




A2P_B_16(4R3W)
?
[Raw transfer]




25A_A_3(3PWK)
?
[Raw transfer]




32 PsiBlast_CBE 96.0148% -86 - C2 -3PZB 10.7 ?
21 PsiBlast_CBE 95.9648% -88 - C2 -4R5H 8.1 ?
23 PsiBlast_CBE 95.8948% -87 - C2 -4R51 7.7 ?
35 PsiBlast_CBE 95.7948% -86 - C2 -3PYL - ? -
37 PsiBlast_CBE 95.7148% -86 - C2 -3PWK 6.8 ?
27 PsiBlast_CBE 95.6948% -85 - C2 -4R3N 10.4 ?
24 PsiBlast_CBE 95.4948% -86 - C2 -4R4J 10.1 ?
5 PsiBlast_PDB 95.4748% -86 - C2 -3PWK 6.4 ?
7 PsiBlast_PDB 95.3548% -85 - C2 -3PYL - ? -
34 PsiBlast_CBE 94.9448% -87 - C2 -3PYL - ? -
3 PsiBlast_PDB 94.8448% -87 - C2 -2GZ2 - ? -
2 PsiBlast_PDB 94.7748% -85 - C2 -2GZ1 - ? -
26 PsiBlast_CBE 94.7048% -87 - C2 -4R3W 5.4 ?
22 PsiBlast_CBE 94.6648% -85 - C2 -4R54 6.5 ?
31 PsiBlast_CBE 94.6248% -83 - C2 -3Q11 7.4 ?
13 PsiBlast_PDB 94.5648% -86 - C2 -4R3W 6.2 ?
29 PsiBlast_CBE 94.5348% -86 - C2 -3Q1L - ? -
14 PsiBlast_PDB 94.5048% -86 - C2 -4R41 7.3 ?
6 PsiBlast_PDB 94.4748% -87 - C2 -3PWS 6.0 ?
18 PsiBlast_PDB 94.3648% -84 - C2 -4R5H 10.1 ?
9 PsiBlast_PDB 94.2948% -86 - C2 -3PZB 10.0 ?
16 PsiBlast_PDB 94.2648% -87 - C2 -4R51 10.4 ?
15 PsiBlast_PDB 94.1448% -83 - C2 -4R4J 10.4 ?
8 PsiBlast_PDB 94.0448% -83 - C2 -3PYX 10.4 ?
12 PsiBlast_PDB 94.0048% -86 - C2 -4R3N 10.9 ?
36 PsiBlast_CBE 93.8448% -84 - C2 -3PWS 6.1 ?
10 PsiBlast_PDB 93.5748% -83 - C2 -3Q11 7.3 ?
25 PsiBlast_CBE 93.5248% -84 - C2 -4R41 7.5 ?
17 PsiBlast_PDB 93.4748% -86 - C2 -4R54 10.6 ?
33 PsiBlast_CBE 93.1148% -83 - C2 -3PYX 10.7 ?
46 HHSearch 87.1535% -88 - C2 -3TZ6 4.0 DHAS_MYCTU
43 PsiBlast_CBE 84.5935% -84 - C2 -3TZ6 4.0 DHAS_MYCTU
44 PsiBlast_CBE 83.5935% -86 - C2 -3VOS 2.4 DHAS_MYCTU
56 HHSearch 76.8133% -81 - C2 -1YS4 2.9 DHAS_METJA