@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1125: (2015-12-21 )
MAKKVVGEIKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNERTKDMGSFNIPVIITVYQDKSFTFITKKPPVTDLIKKASGVEKGSDNPLKNKIAKLTHKQVEEIAQLKMEDLNTSTMEAAKKIVMGSARSMGVEVVD

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_9(3CJQ)
RL11_THETH
[Raw transfer]



SAH_D_11(3CJQ)
RL11_THETH
[Raw transfer]



2MM_H_14(3CJQ)
RL11_THETH
[Raw transfer]



EDO_B_4(3CJS)
RL11_THETH
[Raw transfer]



EDO_B_4(3CJS)
RL11_THETH
[Raw transfer]



4MM_B_9(3EGV)
RL11_THET8
[Raw transfer]



4MM_B_9(3EGV)
RL11_THET8
[Raw transfer]
22 PsiBlast_CBE 90.4161%-121 - C4 -3CJT - RL11_THETH -
26 PsiBlast_CBE 89.1460%-127 - C4 -3CJQ Error RL11_THETH
3 PsiBlast_PDB 88.6763%-114 - C4 -2K3F - RL11_THEMA -
18 PsiBlast_PDB 88.3861%-114 - C4 -3CJT - RL11_THETH -
23 PsiBlast_CBE 88.0461%-117 - C4 -3CJT - RL11_THETH -
24 PsiBlast_CBE 86.9760%-129 - C4 -3CJQ Error RL11_THETH
25 PsiBlast_CBE 85.6160%-127 - C4 -3CJQ Error RL11_THETH
13 PsiBlast_PDB 85.0161% -91 - C4 -2NXN - RL11_THETH -
31 HHSearch 84.5864%-103 - C4 -1MMS - RL11_THEMA -
45 Fugue 84.2763%-103 - C4 -1MMS - RL11_THEMA -
6 PsiBlast_PDB 84.2763%-103 - C4 -1OLN - RL11_THEMA -
4 PsiBlast_PDB 84.2763%-103 - C4 -1MMS - RL11_THEMA -
20 PsiBlast_PDB 84.2163%-107 - C4 -487D - RL11_ECOLI -
2 PsiBlast_PDB 84.1963%-119 - C4 -2JQ7 - RL11_THEMA -
19 PsiBlast_PDB 81.3861%-109 - C4 -2KLM - RL11_THETH -
27 PsiBlast_CBE 77.2162% -97 - C4 -3CF5 - RL11_DEIRA -
16 PsiBlast_PDB 77.0261% -77 - C4 -2E35 - RL11_THETH -
17 PsiBlast_PDB 74.9361% -73 - C4 -2E36 - RL11_THETH -
15 PsiBlast_PDB 74.2061% -82 - C4 -2E34 - RL11_THETH -
14 PsiBlast_PDB 73.8061% -65 - C4 -2H8W - RL11_THETH -
38 HHSearch 73.1467%-146 - C4 -3CJS 2.0 RL11_THETH
30 PsiBlast_CBE 72.2267%-146 - C4 -3CJS 3.0 RL11_THETH
32 HHSearch 70.8860%-135 - C4 -3EGV 3.0 RL11_THET8
29 PsiBlast_CBE 70.8860%-135 - C4 -3EGV 3.0 RL11_THET8