@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1129: (2015-12-21 )
MAKKKHKIPTLKYFLRSLKQIYRLITFKEKMIFFLLVLMAVFSSFVEVMSLTLLMPFITLASDPSRALDDKDWKMVYDFFHFSSPVRLMYFFSFCLVGIYLFRMFYGVFFTYLRGRFSNKKAYQIKQQLFLQHIKNNYLSHLNHNLDSLRDIINNKAEGMFMSFNAFLSLLTEITVIVFFYSTLILTNWKITLVFTTILALQIFFIVKKVTVLIKKKGEMAAKSKAQTLKVFSKFFSNFKITKLKDNHEEAHKLFGENSRKAHDTEIIYSTLQVVPRYSIETVGFSLLILAVAYILFKYGEARMVLPTISMYALALYRILPSVTGVISYYNEIAYNQLATNVVFKSLSKTIVEEDLVPLDFNEKITLQNISFAYKSKHPVLKNFNLTIQKGQKIALIGHSGCGKSTLADIIMGLTYPKSGEIFIDNTLLTSENRRSWRKKIGYIPQNIYLFDGTVGDNIAFGSAIDEKRLIKVCKMAHIYDFLCEHEGLKTQVGEGGAKLSGGQKQRIGIARALYDNPEILVLDEATSALDNETESKIMDEIYQIAKNKTLIVIAHRLSTIERCEVIIDMSQHKDNLG

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(2FGK)

[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




22 PsiBlast_CBE 86.3939%-112 - C1 -5C78 - ? -
3 PsiBlast_PDB 85.9539%-110 - C1 -5C78 - ? -
21 PsiBlast_CBE 85.8239%-111 - C1 -5C78 - ? -
23 PsiBlast_CBE 84.1739%-113 - C1 -5C78 - ? -
2 PsiBlast_PDB 82.2539%-115 - C1 -5C76 - ? -
1 PsiBlast_PDB 76.5739% -93 - C1 -5C73 - ? -
114 HHSearch 72.6823%-111 - C1 -3WMG - ? -
4 PsiBlast_PDB 71.3028%-105 - C1 -4F4C - PGP1_CAEEL -
105 Fugue 64.0027%-107 - C1 -4F4C - PGP1_CAEEL -
113 HHSearch 62.6922%-104 - C1 -3ZDQ - ABCBA_HUMAN -
103 Fugue 60.9022% -89 - C1 -3B60 - MSBA_SALTY -
17 PsiBlast_PDB 60.4831% -88 - C1 -4M1M - MDR1A_MOUSE -
111 HHSearch 59.9725% -84 - C1 -3B60 - MSBA_SALTY -
40 PsiBlast_CBE 59.9231% -91 - C1 -4M2S - MDR1A_MOUSE -
35 PsiBlast_CBE 59.2331% -90 - C1 -4M1M - MDR1A_MOUSE -
41 PsiBlast_CBE 58.6331% -87 - C1 -4M2S - MDR1A_MOUSE -
38 PsiBlast_CBE 58.4131% -92 - C1 -4M2T - MDR1A_MOUSE -
39 PsiBlast_CBE 57.9831% -88 - C1 -4M2T - MDR1A_MOUSE -
37 PsiBlast_CBE 57.7531% -90 - C1 -3G60 - MDR1A_MOUSE -
19 PsiBlast_PDB 57.7531% -88 - C1 -3G61 - MDR1A_MOUSE -
14 PsiBlast_PDB 57.6744%-110 - C1 -2FFA 6.4
33 PsiBlast_CBE 57.6644%-108 - C1 -1XEF 7.3 HLYBP_ECOLX
15 PsiBlast_PDB 57.1244%-108 - C1 -2FGJ 7.0 HLYBP_ECOLX
32 PsiBlast_CBE 57.0244%-114 - C1 -1XEF 7.4 HLYBP_ECOLX
29 PsiBlast_CBE 57.0144%-113 - C1 -2FGJ 7.0 HLYBP_ECOLX
8 PsiBlast_PDB 56.9544%-112 - C1 -2FF7 6.2
9 PsiBlast_PDB 56.9144%-113 - C1 -2PMK 6.8
27 PsiBlast_CBE 56.5944%-112 - C1 -2FGK 7.2 HLYBP_ECOLX
25 PsiBlast_CBE 56.0244%-112 - C1 -2FGK 7.1
31 PsiBlast_CBE 56.0044%-109 - C1 -1XEF 7.1
13 PsiBlast_PDB 55.6144%-108 - C1 -1XEF 6.6 HLYBP_ECOLX
11 PsiBlast_PDB 55.5144%-105 - C1 -2FGK 7.2 HLYBP_ECOLX
26 PsiBlast_CBE 55.4644%-106 - C1 -2FGK 6.5 HLYBP_ECOLX
28 PsiBlast_CBE 55.4444%-109 - C1 -2FGJ 7.0
30 PsiBlast_CBE 54.7744%-110 - C1 -2FGJ 7.3 HLYBP_ECOLX
120 HHSearch 47.5635% -91 * C1 *3VX4 6.9 ?
66 PsiBlast_CBE 47.0438%-100 - C1 -3VX4 6.9 ?
118 HHSearch 45.3431% -80 - C1 -3FVQ 7.2 FBPC_NEIG1
121 HHSearch 43.9336% -89 - C1 -1MV5 6.3 LMRA_LACLA