@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1170: (2015-12-21 )
MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELGFLGHYHPILLPLESRIKNEFLHLGLSGANVTLPFKERAFQICDKIKGIALECASVNTLVLENDELVGYNTDALGFYLSLKHQNYQNDQNALILGAGGSAKALACGLQKQGLKVSVLNRSARGLDFFQRLGCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKESKLAYDLAYGFLTPFLSLAKELKIPFQDGKDMLIYQASLSFEKFSDSQIPYSKAFEVMRSVF

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DHK_B_4(3PHJ)
AROE_HELPY
[Raw transfer]




NDP_B_6(3PHI)
AROE_HELPY
[Raw transfer]




SKM_A_3(4FQ8)
AROE_HELPY
[Raw transfer]




NDP_A_4(3PHI)
AROE_HELPY
[Raw transfer]




SKM_A_2(3PHH)
AROE_HELPY
[Raw transfer]




SKM_A_2(4FOS)
AROE_HELPY
[Raw transfer]




SKM_A_3(4FSH)
AROE_HELPY
[Raw transfer]




NAP_B_7(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_2(3PHH)
AROE_HELPY
[Raw transfer]




DHK_A_3(3PHJ)
AROE_HELPY
[Raw transfer]




NAP_C_9(2HK9)
AROE_AQUAE
[Raw transfer]




NAP_D_11(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_3(4FR5)
AROE_HELPY
[Raw transfer]




SKM_B_4(4FR5)
AROE_HELPY
[Raw transfer]




SKM_B_4(4FQ8)
AROE_HELPY
[Raw transfer]




SKM_B_8(2D5C)
AROE_THET8
[Raw transfer]




SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]




SKM_A_6(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_6(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_B_6(3PGJ)
AROE_VIBCH
[Raw transfer]




SKM_C_7(3PGJ)
AROE_VIBCH
[Raw transfer]




SKM_A_5(3PGJ)
AROE_VIBCH
[Raw transfer]




SKM_D_8(3PGJ)
AROE_VIBCH
[Raw transfer]




SKM_B_7(3SEF)
AROE_VIBCH
[Raw transfer]




DTV_A_20(1NYT)
AROE_ECOLI
[Raw transfer]




DTV_A_20(1NYT)
AROE_ECOLI
[Raw transfer]




22 PsiBlast_CBE 93.1992%-126 - C4 -3PHI 9.8 AROE_HELPY
9 PsiBlast_PDB 93.1492%-123 - C4 -4FQ8 3.2 AROE_HELPY
1 PsiBlast_PDB 93.0394%-124 - C4 -4FSH 3.8 AROE_HELPY
6 PsiBlast_PDB 92.9692%-125 - C4 -4FOO - AROE_HELPY -
23 PsiBlast_CBE 92.7192%-124 - C4 -4FQ8 3.7 AROE_HELPY
10 PsiBlast_PDB 92.5592%-120 - C4 -4FR5 3.6 AROE_HELPY
8 PsiBlast_PDB 92.5492%-128 - C4 -4FPX - AROE_HELPY -
7 PsiBlast_PDB 92.4792%-122 - C4 -4FOS 3.5 AROE_HELPY
2 PsiBlast_PDB 92.4692%-126 - C4 -3PHG - AROE_HELPY -
24 PsiBlast_CBE 92.4392%-124 - C4 -4FR5 3.5 AROE_HELPY
3 PsiBlast_PDB 92.1792%-124 - C4 -3PHH 4.1 AROE_HELPY
4 PsiBlast_PDB 91.8392%-123 - C4 -3PHI 7.9 AROE_HELPY
5 PsiBlast_PDB 91.5792%-125 - C4 -3PHJ 3.9 AROE_HELPY
21 PsiBlast_CBE 91.4692%-127 - C4 -3PHJ 3.8 AROE_HELPY
94 HHSearch 78.9282% -96 - C4 -3PHH 4.1 AROE_HELPY
45 PsiBlast_CBE 63.7935%-103 - C4 -1WXD - AROE_THET8 -
44 PsiBlast_CBE 63.7535%-100 - C4 -2CY0 - AROE_THET8 -
41 PsiBlast_CBE 63.4735%-101 - C4 -2D5C 3.6 AROE_THET8
40 PsiBlast_CBE 63.2435% -99 - C4 -2EV9 - AROE_THET8 -
42 PsiBlast_CBE 63.1735% -97 - C4 -2D5C - AROE_THET8 -
88 HHSearch 62.4431% -83 - C4 -1NYT 3.0 AROE_ECOLI
25 PsiBlast_CBE 62.0332% -94 - C4 -2HK9 8.8 AROE_AQUAE
20 PsiBlast_PDB 61.7032% -93 - C4 -1NYT 3.0 AROE_ECOLI
13 PsiBlast_PDB 61.1532% -98 - C4 -2HK9 3.6 AROE_AQUAE
27 PsiBlast_CBE 60.8032% -96 - C4 -2HK9 9.2 AROE_AQUAE
26 PsiBlast_CBE 60.3932% -94 - C4 -2HK9 6.9 AROE_AQUAE
85 HHSearch 59.4135% -76 * C4 *2D5C 3.6 AROE_THET8
98 HHSearch 57.1634% -84 - C4 -2HK9 3.6 AROE_AQUAE
30 PsiBlast_CBE 56.7733% -75 - C4 -3PGJ 3.1 AROE_VIBCH
16 PsiBlast_PDB 56.1933% -77 - C4 -3PGJ 3.1 AROE_VIBCH
31 PsiBlast_CBE 55.8033% -77 - C4 -3PGJ 3.6 AROE_VIBCH
29 PsiBlast_CBE 55.6233% -72 - C4 -3SEF 2.6 AROE_VIBCH
32 PsiBlast_CBE 54.8033% -74 - C4 -3PGJ 3.2 AROE_VIBCH