@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1219: (2015-12-21 )
MAISIKSPKEIKALRKAGELTAQALALLEREVRPGVSLLELDKMAEDFIKSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDYVLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTER

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U17_A_5(2GGB)
MAP1_ECOLI
[Raw transfer]




NLP_B_10(2GU6)
MAP1_ECOLI
[Raw transfer]




NLP_A_5(1C27)
MAP1_ECOLI
[Raw transfer]




Q07_A_5(4U69)
MAP11_HUMAN
[Raw transfer]




MPH_A_5(1C23)
MAP1_ECOLI
[Raw transfer]




Q08_A_5(4U1B)
MAP11_HUMAN
[Raw transfer]




U16_A_5(2GG9)
MAP1_ECOLI
[Raw transfer]




NLP_A_9(2GU6)
MAP1_ECOLI
[Raw transfer]




Q06_A_6(4U6C)
MAP11_HUMAN
[Raw transfer]




W29_A_4(3D27)
MAP1_ECOLI
[Raw transfer]




YE7_A_4(2P98)
MAP1_ECOLI
[Raw transfer]




NLP_B_10(2GU5)
MAP1_ECOLI
[Raw transfer]




Q04_A_5(4U70)
MAP11_HUMAN
[Raw transfer]




NLP_B_10(2GU4)
MAP1_ECOLI
[Raw transfer]




MPJ_A_5(1C24)
MAP1_ECOLI
[Raw transfer]




NLP_A_7(2GTX)
MAP1_ECOLI
[Raw transfer]




NLP_A_9(2GU4)
MAP1_ECOLI
[Raw transfer]




NLP_A_9(2GU5)
MAP1_ECOLI
[Raw transfer]




NLP_B_8(2GTX)
MAP1_ECOLI
[Raw transfer]




5C1_A_3(4A6W)
?
[Raw transfer]




Q02_A_4(4U6E)
MAP11_HUMAN
[Raw transfer]




IKY_B_7(4A6V)
?
[Raw transfer]




B21_A_5(2Q93)
MAP1_ECOLI
[Raw transfer]




IKY_A_5(4A6V)
?
[Raw transfer]




YE6_A_4(2P99)
MAP1_ECOLI
[Raw transfer]




GOL_A_9(2B3H)
MAP11_HUMAN
[Raw transfer]




MET_A_6(4U6J)
MAP11_HUMAN
[Raw transfer]




MET_A_6(4U75)
MAP11_HUMAN
[Raw transfer]




GOL_A_9(2B3H)
MAP11_HUMAN
[Raw transfer]




A18_A_5(2Q96)
MAP1_ECOLI
[Raw transfer]




GOL_A_6(4U76)
MAP11_HUMAN
[Raw transfer]




GOL_A_4(2B3L)
MAP11_HUMAN
[Raw transfer]




B23_A_5(2Q92)
MAP1_ECOLI
[Raw transfer]




FC2_A_5(2EVM)
MAP1_ECOLI
[Raw transfer]




U11_A_5(2GG0)
MAP1_ECOLI
[Raw transfer]




MET_C_17(4FO8)
?
[Raw transfer]




MET_D_21(4FO8)
?
[Raw transfer]




FCD_A_5(1XNZ)
MAP1_ECOLI
[Raw transfer]




MET_A_5(2GGC)
MAP1_ECOLI
[Raw transfer]




U14_A_5(2GG7)
MAP1_ECOLI
[Raw transfer]




MET_A_5(1C21)
MAP1_ECOLI
[Raw transfer]




MET_B_4(3MX6)
MAP1_RICPR
[Raw transfer]




U13_A_5(2GG3)
MAP1_ECOLI
[Raw transfer]




FC3_A_5(2EVC)
MAP1_ECOLI
[Raw transfer]




MET_B_13(4FO8)
?
[Raw transfer]




U12_A_5(2GG2)
MAP1_ECOLI
[Raw transfer]




HCM_A_4(4IF7)
MAP12_MYCTU
[Raw transfer]




U12_A_5(2GG2)
MAP1_ECOLI
[Raw transfer]




A04_A_5(2Q94)
MAP1_ECOLI
[Raw transfer]




A05_A_5(2Q95)
MAP1_ECOLI
[Raw transfer]




MET_A_9(4FO8)
?
[Raw transfer]




MET_A_3(3MX6)
MAP1_RICPR
[Raw transfer]




MET_A_3(3MX6)
MAP1_RICPR
[Raw transfer]




U19_A_5(2GG5)
MAP1_ECOLI
[Raw transfer]




TMG_A_7(1YVM)
MAP1_ECOLI
[Raw transfer]




MF3_A_5(1C22)
MAP1_ECOLI
[Raw transfer]




PVP_A_5(4IKR)
MAP11_HUMAN
[Raw transfer]




7NP_A_2(4PNC)
?
[Raw transfer]




CT0_A_10(2EVO)
MAP1_ECOLI
[Raw transfer]




QMS_A_6(2BB7)
MAP1_ECOLI
[Raw transfer]




CT0_B_9(2EVO)
MAP1_ECOLI
[Raw transfer]




LMR_A_8(3TAV)
?
[Raw transfer]




LMR_A_8(3TAV)
?
[Raw transfer]




YE6_A_5(2P9A)
MAP1_ECOLI
[Raw transfer]




23 PsiBlast_CBE 96.6736% -88 - C2 -4FO8 1.6 ?
26 PsiBlast_CBE 94.6536% -89 - C2 -4FO7 - ? -
29 PsiBlast_CBE 94.1536% -86 - C2 -4JUQ - ? -
21 PsiBlast_CBE 93.6436% -87 - C2 -4FO8 1.5 ?
3 PsiBlast_PDB 93.4236% -84 - C2 -4JUQ - ? -
25 PsiBlast_CBE 93.1036% -87 - C2 -4FO7 - ? -
118 HHSearch 93.0236% -86 - C2 -3TAV 3.4 ?
22 PsiBlast_CBE 93.0136% -85 - C2 -4FO8 2.2 ?
10 PsiBlast_PDB 93.0138% -82 - C2 -4A6V 3.7 ?
18 PsiBlast_PDB 92.8838% -84 - C2 -2P9A 4.0 MAP1_ECOLI
27 PsiBlast_CBE 92.8736% -86 - C2 -4JUQ - ? -
43 PsiBlast_CBE 92.8338% -83 - C2 -2GG2 3.3 MAP1_ECOLI
61 PsiBlast_CBE 92.7336% -83 - C2 -3TAV - ? -
2 PsiBlast_PDB 92.7136% -84 - C2 -4FO8 1.8 ?
17 PsiBlast_PDB 92.6838% -84 - C2 -2P98 5.2 MAP1_ECOLI
62 PsiBlast_CBE 92.6436% -84 - C2 -3TAV 3.4 ?
30 PsiBlast_CBE 92.6238% -82 - C2 -4A6V 4.7 ?
5 PsiBlast_PDB 92.5338% -86 - C2 -2BB7 3.4 MAP1_ECOLI
1 PsiBlast_PDB 92.5136% -82 - C2 -4FO7 - ? -
44 PsiBlast_CBE 92.5038% -82 - C2 -2GG0 4.5 MAP1_ECOLI
46 PsiBlast_CBE 92.4138% -82 - C2 -1C24 4.6 MAP1_ECOLI
40 PsiBlast_CBE 92.3738% -83 - C2 -2GG7 2.9 MAP1_ECOLI
38 PsiBlast_CBE 92.3338% -82 - C2 -2GG9 3.5 MAP1_ECOLI
37 PsiBlast_CBE 92.2738% -83 - C2 -2GGB 3.3 MAP1_ECOLI
42 PsiBlast_CBE 92.2638% -82 - C2 -2GG3 3.7 MAP1_ECOLI
48 PsiBlast_CBE 92.2538% -82 - C2 -1C22 2.4 MAP1_ECOLI
53 PsiBlast_CBE 92.2337% -81 - C2 -2GU6 3.6 MAP1_ECOLI
14 PsiBlast_PDB 92.2238% -82 - C2 -4A6W 3.6 ?
7 PsiBlast_PDB 92.1738% -82 - C2 -2EVM 4.8 MAP1_ECOLI
32 PsiBlast_CBE 92.1538% -82 - C2 -2Q96 3.9 MAP1_ECOLI
13 PsiBlast_PDB 92.1538% -83 - C2 -1YVM 4.1 MAP1_ECOLI
115 HHSearch 92.0638% -86 * C2 *2GG2 3.1 MAP1_ECOLI
52 PsiBlast_CBE 92.0137% -83 - C2 -2GU6 4.9 MAP1_ECOLI
33 PsiBlast_CBE 91.7338% -84 - C2 -2Q95 4.8 MAP1_ECOLI
20 PsiBlast_PDB 91.7238% -83 - C2 -2Q94 4.9 MAP1_ECOLI
60 PsiBlast_CBE 91.6637% -81 - C2 -2GTX 3.4 MAP1_ECOLI
6 PsiBlast_PDB 91.6438% -81 - C2 -2EVC 5.4 MAP1_ECOLI
41 PsiBlast_CBE 91.6038% -84 - C2 -2GG5 4.5 MAP1_ECOLI
34 PsiBlast_CBE 91.5738% -82 - C2 -2Q93 4.5 MAP1_ECOLI
54 PsiBlast_CBE 91.5437% -81 - C2 -2GU5 4.9 MAP1_ECOLI
47 PsiBlast_CBE 91.5438% -80 - C2 -1C23 5.0 MAP1_ECOLI
31 PsiBlast_CBE 91.3938% -79 - C2 -2EVO 3.0 MAP1_ECOLI
4 PsiBlast_PDB 91.3138% -81 - C2 -1XNZ 4.4 MAP1_ECOLI
35 PsiBlast_CBE 91.2938% -80 - C2 -2P99 4.9 MAP1_ECOLI
55 PsiBlast_CBE 91.2737% -80 - C2 -2GU5 3.4 MAP1_ECOLI
8 PsiBlast_PDB 91.1838% -80 - C2 -2EVO 3.2 MAP1_ECOLI
57 PsiBlast_CBE 91.1737% -80 - C2 -2GU4 5.0 MAP1_ECOLI
36 PsiBlast_CBE 91.0438% -84 - C2 -2GGC 2.7 MAP1_ECOLI
45 PsiBlast_CBE 90.9338% -81 - C2 -1C27 4.8 MAP1_ECOLI
19 PsiBlast_PDB 90.9138% -82 - C2 -2Q92 3.7 MAP1_ECOLI
58 PsiBlast_CBE 90.8737% -82 - C2 -3D27 4.5 MAP1_ECOLI
15 PsiBlast_PDB 90.6938% -80 - C2 -4PNC 3.3 ?
49 PsiBlast_CBE 90.5938% -79 - C2 -1C21 4.4 MAP1_ECOLI
56 PsiBlast_CBE 90.4737% -80 - C2 -2GU4 5.0 MAP1_ECOLI
59 PsiBlast_CBE 90.1837% -79 - C2 -2GTX 5.1 MAP1_ECOLI
96 PsiBlast_CBE 88.6532% -87 - C2 -3MX6 2.3 MAP1_RICPR
97 PsiBlast_CBE 88.5532% -87 - C2 -3MX6 2.4 MAP1_RICPR
116 HHSearch 88.5432% -84 - C2 -3MX6 2.2 MAP1_RICPR
68 PsiBlast_CBE 88.1632% -82 - C2 -4U75 2.5 MAP11_HUMAN
89 PsiBlast_CBE 87.6932% -80 - C2 -2B3L 2.1 MAP11_HUMAN
85 PsiBlast_CBE 87.6032% -83 - C2 -4IKR 5.3 MAP11_HUMAN
71 PsiBlast_CBE 87.2632% -79 - C2 -4U70 2.4 MAP11_HUMAN
91 PsiBlast_CBE 87.2432% -81 - C2 -2B3H 2.0 MAP11_HUMAN
111 HHSearch 87.0633% -80 - C2 -2B3H 2.0 MAP11_HUMAN
74 PsiBlast_CBE 86.7532% -82 - C2 -4U6J 2.4 MAP11_HUMAN
78 PsiBlast_CBE 86.7232% -82 - C2 -4U1B 4.6 MAP11_HUMAN
76 PsiBlast_CBE 86.7132% -80 - C2 -4U6C 3.9 MAP11_HUMAN
77 PsiBlast_CBE 86.6932% -79 - C2 -4U69 3.0 MAP11_HUMAN
75 PsiBlast_CBE 86.4532% -80 - C2 -4U6E 2.2 MAP11_HUMAN
67 PsiBlast_CBE 85.7932% -80 - C2 -4U76 1.9 MAP11_HUMAN
99 PsiBlast_CBE 84.6533% -82 - C2 -4IF7 3.1 MAP12_MYCTU