@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1264: (2015-12-22 )
MLAKMSFMQNVKNIQEVDVNHKRVLIRVDFNVPLDENLNITDDTRIRESLPTIQFCIDNKAKDIILVSHLGRPKGVEEKLSLKPFLKRLERLLNHEVVFSQNIAQLKQALNENAPTRIFLLENIRFLKGEEENDENLAKDLASLCDVFVNDAFGTSHRKHASTYGTAKFAPIKVSGFLLKKEIDSFYQAFNHPLRPLLLIVGGAKVSSKLTLLKNILDLIDKLIIAGAMSNTFLKALGYDVQDSSVEDALINDALELLQSAKEKKVKVYLPIDAVTTDDILNPKHIKISPVQDIEPKHKIADIGPASLKLFSEVIESAPTILWNGPLGVHEKQEFARGTTFLAHKIANTYAFSLIGGGDTIDAINRAGEKDNMSFISTGGGASLELLEGKILPCFEVLDKRH

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]




ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]




LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]




ADP_C_9(4NG4)
PGK_COXBU
[Raw transfer]




ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]




LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]




AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]




ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]




ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]




3PG_D_12(2Y3I)
PGK1_HUMAN
[Raw transfer]




3PG_A_7(2Y3I)
PGK1_HUMAN
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]




3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]




3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(4O3F)
PGK1_MOUSE
[Raw transfer]




3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]




3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(4O33)
PGK1_HUMAN
[Raw transfer]




3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]




1 PsiBlast_PDB 95.0848% -98 - C7 -3Q3V - PGK_CAMJE -
73 HHSearch 94.8349% -96 * C7 *3Q3V 3.2 PGK_CAMJE
74 HHSearch 94.2746%-100 - C7 -1PHP 7.4 PGK_GEOSE
2 PsiBlast_PDB 93.9445% -98 - C7 -1PHP - PGK_GEOSE -
38 PsiBlast_CBE 93.2539%-108 - C7 -2ZGV 5.0 PGK1_HUMAN
49 PsiBlast_CBE 93.2139%-107 - C7 -4O3F 5.8 PGK1_MOUSE
39 PsiBlast_CBE 93.1639% -98 - C7 -2X15 7.5 PGK1_HUMAN
31 PsiBlast_CBE 92.7139%-109 - C7 -3C3C 3.2 PGK1_HUMAN
33 PsiBlast_CBE 92.6339%-108 - C7 -3C3B - PGK1_HUMAN -
18 PsiBlast_PDB 92.5739%-100 - C7 -2XE8 4.3 PGK1_HUMAN
16 PsiBlast_PDB 92.5539%-101 - C7 -2XE6 5.6 PGK1_HUMAN
45 PsiBlast_CBE 92.2239% -96 - C7 -2WZD 7.0 PGK1_HUMAN
43 PsiBlast_CBE 92.1739% -99 - C7 -4O33 5.4 PGK1_HUMAN
77 HHSearch 92.1446% -97 - C7 -1VPE 8.2 PGKT_THEMA
20 PsiBlast_PDB 92.1039% -97 - C7 -3ZOZ 7.4 PGK1_HUMAN
37 PsiBlast_CBE 92.0739%-108 - C7 -3C39 5.3 PGK1_HUMAN
35 PsiBlast_CBE 91.7539%-102 - C7 -3C3A 3.8 PGK1_HUMAN
17 PsiBlast_PDB 91.6739% -96 - C7 -2XE7 6.0 PGK1_HUMAN
44 PsiBlast_CBE 91.5339% -96 - C7 -2X14 8.1 PGK1_HUMAN
29 PsiBlast_CBE 91.4739% -95 - C7 -4AXX 7.6 PGK1_HUMAN
40 PsiBlast_CBE 91.4239% -96 - C7 -2X13 6.9 PGK1_HUMAN
42 PsiBlast_CBE 91.3839% -97 - C7 -2WZB 8.0 PGK1_HUMAN
41 PsiBlast_CBE 91.0039% -97 - C7 -2WZC 7.8 PGK1_HUMAN
76 HHSearch 90.9642% -91 - C7 -2WZB 8.0 PGK1_HUMAN
19 PsiBlast_PDB 90.9139% -96 - C7 -2YBE 7.4 PGK1_HUMAN
36 PsiBlast_CBE 90.8239%-108 - C7 -3C39 5.6 PGK1_HUMAN
32 PsiBlast_CBE 90.7839%-108 - C7 -3C3B 3.1 PGK1_HUMAN
81 HHSearch 90.7042% -96 - C7 -1QPG 8.1 PGK_YEAST
3 PsiBlast_PDB 90.5446% -97 - C7 -1VPE 8.2 PGKT_THEMA
34 PsiBlast_CBE 90.3839%-107 - C7 -3C3A 4.6 PGK1_HUMAN
28 PsiBlast_CBE 90.3840% -96 - C7 -2Y3I 6.7 PGK1_HUMAN
30 PsiBlast_CBE 90.3039%-106 - C7 -3C3C 4.7 PGK1_HUMAN
15 PsiBlast_PDB 90.3040% -97 - C7 -2Y3I 7.0 PGK1_HUMAN
51 PsiBlast_CBE 89.9138%-100 - C7 -1KF0 5.1 PGK1_PIG
47 PsiBlast_CBE 89.8639% -99 - C7 -1VJC 5.3 PGK1_PIG
14 PsiBlast_PDB 89.6740%-100 - C7 -2PAA 5.2 PGK2_MOUSE
50 PsiBlast_CBE 89.6239%-102 - C7 -1QPG 8.1 PGK_YEAST
46 PsiBlast_CBE 89.5539% -98 - C7 -1VJD 5.4 PGK1_PIG
13 PsiBlast_PDB 89.4140% -99 - C7 -2P9T 4.9 PGK2_MOUSE
27 PsiBlast_CBE 89.0140%-107 - C7 -2PAA 3.7 PGK2_MOUSE
22 PsiBlast_CBE 88.9641% -97 - C7 -4NG4 6.2 PGK_COXBU
21 PsiBlast_CBE 88.5841% -99 - C7 -4NG4 6.8 PGK_COXBU
4 PsiBlast_PDB 88.5043% -99 - C7 -4FEY 4.2 PGK_FRATT
5 PsiBlast_PDB 87.6541% -95 - C7 -4NG4 6.4 PGK_COXBU
54 PsiBlast_CBE 87.5138% -97 - C7 -1HDI 5.2 PGK1_PIG
82 HHSearch 83.9732% -95 - C7 -2CUN 2.4 PGK_PYRHO
57 PsiBlast_CBE 82.2931% -89 - C7 -2CUN 2.4 PGK_PYRHO
56 PsiBlast_CBE 80.9631% -86 - C7 -2CUN 2.8 PGK_PYRHO
83 HHSearch 76.0141% -85 - C7 -1FW8 2.7 PGK_YEAST
48 PsiBlast_CBE 59.3640% 4 - C7 -3PGK 3.2 PGK_YEAST
84 HHSearch 40.9244% -70 - C7 -1FW8 3.2 PGK_YEAST