@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1266: (2015-12-22 )
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYRKDFDFSL

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FCF_A_2(3FCF)
UNG_HUMAN
[Raw transfer]




3FL_B_8(3FCL)
UNG_HUMAN
[Raw transfer]




302_B_2(2HXM)
UNG_HUMAN
[Raw transfer]




5NU_A_2(4WS5)
?
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




URA_A_2(4WPL)
?
[Raw transfer]




URA_A_2(4WRU)
?
[Raw transfer]




URF_A_2(4WS1)
?
[Raw transfer]




6UA_A_4(4WS2)
?
[Raw transfer]




URF_A_2(4WS0)
?
[Raw transfer]




5NU_A_4(4WS4)
?
[Raw transfer]




3FL_A_3(3FCL)
UNG_HUMAN
[Raw transfer]




URA_A_2(4WRV)
?
[Raw transfer]




GOL_B_5(1OKB)
?
[Raw transfer]




GOL_A_3(1OKB)
?
[Raw transfer]




URA_D_4(1UDH)
UNG_HHV11
[Raw transfer]




6UA_A_2(4WS3)
?
[Raw transfer]




GOL_A_8(4WRW)
?
[Raw transfer]




5UC_A_2(4WS7)
?
[Raw transfer]




FCK_B_2(3FCK)
UNG_HUMAN
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




TUL_A_2(4WS8)
?
[Raw transfer]




GOL_A_5(4UQM)
?
[Raw transfer]




NACID_B_2(4UQM)
?
[Raw transfer]

-

CIT_A_2(4WPK)
?
[Raw transfer]




FLC_A_2(3A7N)
UNG_MYCTU
[Raw transfer]




CIT_A_3(4WS4)
?
[Raw transfer]




CIT_A_2(4WRY)
?
[Raw transfer]




NACID_D_1(1LAU)
UNG_HHV11
[Raw transfer]

-

CIT_A_3(4WS2)
?
[Raw transfer]




CIT_A_4(4WS6)
?
[Raw transfer]




CIT_A_2(4WRZ)
?
[Raw transfer]




NACID_A_1(2SSP)
UNG_HUMAN
[Raw transfer]

-

NACID_B_1(1EMJ)
UNG_HUMAN
[Raw transfer]

-

NACID_C_2(2OXM)
UNG_HUMAN
[Raw transfer]

-

NACID_B_2(4SKN)
UNG_HUMAN
[Raw transfer]

-

NACID_A_1(1SSP)
UNG_HUMAN
[Raw transfer]

-

NACID_C_2(1EMH)
UNG_HUMAN
[Raw transfer]

-

NACID_C_2(1Q3F)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_2(2OYT)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

NACID_B_1(1EMH)
UNG_HUMAN
[Raw transfer]

-

3 PsiBlast_PDB 93.7243%-120 - C8 -3ZOR - UNG_BACSU -
78 Fugue 93.3639%-117 * C8 *1UUG - UNG_ECOLI -
2 PsiBlast_PDB 93.0943%-122 - C8 -3ZOQ - UNG_BACSU -
32 PsiBlast_CBE 91.6338%-108 - C8 -2BOO - UNG_DEIRA -
64 HHSearch 91.3938%-112 - C8 -3FCI 6.2 UNG_HUMAN
33 PsiBlast_CBE 91.1438%-109 - C8 -3UFM - UNG_DEIRA -
62 HHSearch 91.0943%-101 - C8 -3TR7 - UNG_COXBU -
1 PsiBlast_PDB 90.8945%-101 - C8 -3TR7 - UNG_COXBU -
4 PsiBlast_PDB 90.7139%-107 - C8 -3TKB - UNG_HUMAN -
65 HHSearch 90.4238%-114 - C8 -3UF7 5.1 UNG_ECOLI
31 PsiBlast_CBE 90.3639%-123 - C8 -3CXM 3.3 ?
19 PsiBlast_PDB 90.2639%-106 - C8 -1YUO - UNG_HUMAN -
6 PsiBlast_PDB 90.2039%-103 - C8 -1SSP 7.6 UNG_HUMAN
7 PsiBlast_PDB 89.9639%-105 - C8 -1EMH 10.4 UNG_HUMAN
5 PsiBlast_PDB 89.7439%-107 - C8 -1UGH - UNG_HUMAN -
8 PsiBlast_PDB 89.6839%-104 - C8 -1EMJ 8.4 UNG_HUMAN
24 PsiBlast_CBE 89.6139%-101 - C8 -2SSP 6.2 UNG_HUMAN
21 PsiBlast_CBE 89.4339%-104 - C8 -3FCL 5.9 UNG_HUMAN
34 PsiBlast_CBE 89.2138%-103 - C8 -4UQM 8.6 ?
17 PsiBlast_PDB 88.9539%-103 - C8 -3FCL 5.6 UNG_HUMAN
9 PsiBlast_PDB 88.9339%-103 - C8 -1Q3F 3.8 UNG_HUMAN
14 PsiBlast_PDB 88.9239%-104 - C8 -3FCF 7.0 UNG_HUMAN
16 PsiBlast_PDB 88.8839%-106 - C8 -3FCK 3.8 UNG_HUMAN
10 PsiBlast_PDB 88.8339%-104 - C8 -2HXM 7.2 UNG_HUMAN
12 PsiBlast_PDB 88.7639%-101 - C8 -2OXM 3.7 UNG_HUMAN
15 PsiBlast_PDB 88.5739%-107 - C8 -3FCI 6.2 UNG_HUMAN
23 PsiBlast_CBE 88.2942%-108 - C8 -1OKB 3.2 ?
66 HHSearch 88.1138%-110 - C8 -3CXM 3.3 ?
13 PsiBlast_PDB 87.6039%-102 - C8 -2OYT 2.1 UNG_HUMAN
29 PsiBlast_CBE 87.1539%-101 - C8 -4SKN 3.4 UNG_HUMAN
22 PsiBlast_CBE 87.0142%-109 - C8 -1OKB 3.1 ?
45 PsiBlast_CBE 83.9337%-129 - C8 -4WS0 2.6 ?
40 PsiBlast_CBE 83.9337%-134 - C8 -4WS5 3.9 ?
51 PsiBlast_CBE 83.6637%-128 - C8 -4WRU 3.5 ?
55 PsiBlast_CBE 83.5631%-113 - C8 -1UDH 3.5 UNG_HHV11
54 PsiBlast_CBE 82.9337%-126 - C8 -3A7N 2.4 UNG_MYCTU
38 PsiBlast_CBE 82.9237%-123 - C8 -4WS7 3.3 ?
44 PsiBlast_CBE 82.8437%-126 - C8 -4WS1 3.2 ?
49 PsiBlast_CBE 82.5537%-124 - C8 -4WRW 2.5 ?
37 PsiBlast_CBE 82.5037%-122 - C8 -4WS8 3.1 ?
57 PsiBlast_CBE 82.4731%-117 - C8 -1LAU 5.9 UNG_HHV11
47 PsiBlast_CBE 82.1837%-126 - C8 -4WRY 3.2 ?
46 PsiBlast_CBE 82.1637%-127 - C8 -4WRZ 3.3 ?
52 PsiBlast_CBE 82.1337%-129 - C8 -4WPL 3.3 ?
53 PsiBlast_CBE 82.1137%-124 - C8 -4WPK 3.4 ?
41 PsiBlast_CBE 82.0737%-125 - C8 -4WS4 3.9 ?
50 PsiBlast_CBE 81.9437%-128 - C8 -4WRV 3.4 ?
39 PsiBlast_CBE 81.8737%-126 - C8 -4WS6 3.4 ?
42 PsiBlast_CBE 81.8637%-131 - C8 -4WS3 3.6 ?
43 PsiBlast_CBE 81.5637%-128 - C8 -4WS2 3.7 ?