@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1273: (2015-12-22 )
MEIKTFLECALKEDLGHGDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMTGIECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSPKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLKHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMSAGADIVMCDNMSVGETKEIAAYREAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKMA

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NCN_K_11(2B7Q)
NADC_HELPY
[Raw transfer]



NCN_I_9(2B7Q)
NADC_HELPY
[Raw transfer]



NCN_G_7(2B7Q)
NADC_HELPY
[Raw transfer]



NCN_B_4(4I9A)
?
[Raw transfer]



NCN_A_3(4I9A)
?
[Raw transfer]



PHT_O_15(2B7P)
NADC_HELPY
[Raw transfer]



PHT_Q_17(2B7P)
NADC_HELPY
[Raw transfer]



NTM_Q_17(2B7N)
NADC_HELPY
[Raw transfer]



NTM_O_15(2B7N)
NADC_HELPY
[Raw transfer]



NTM_M_13(2B7N)
NADC_HELPY
[Raw transfer]



PHT_B_4(3C2R)
NADC_YEAST
[Raw transfer]



FMT_A_6(3L0G)
?
[Raw transfer]



NTM_B_4(1QAP)
NADC_SALTY
[Raw transfer]



NTM_A_2(3C2O)
NADC_YEAST
[Raw transfer]



PRP_A_2(3C2F)
NADC_YEAST
[Raw transfer]



NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]



NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]



PHT_A_3(3C2R)
NADC_YEAST
[Raw transfer]



PRP_A_2(3C2V)
NADC_YEAST
[Raw transfer]
113 HHSearch 99.7196%-115 - C6 -2B7N 3.5 NADC_HELPY
1 PsiBlast_PDB 99.4995%-115 - C6 -2B7N - NADC_HELPY -
26 PsiBlast_CBE 98.6795%-112 - C6 -2B7N 3.6 NADC_HELPY
23 PsiBlast_CBE 98.6195%-112 - C6 -2B7P 3.9 NADC_HELPY
21 PsiBlast_CBE 98.1695%-110 - C6 -2B7Q 4.8 NADC_HELPY
25 PsiBlast_CBE 98.1195%-114 - C6 -2B7N 3.4 NADC_HELPY
2 PsiBlast_PDB 98.0295%-109 - C6 -2B7P - NADC_HELPY -
22 PsiBlast_CBE 96.9795%-107 - C6 -2B7Q 4.9 NADC_HELPY
24 PsiBlast_CBE 96.2695%-113 - C6 -2B7P 3.7 NADC_HELPY
3 PsiBlast_PDB 95.9695%-106 - C6 -2B7Q 4.3 NADC_HELPY
114 HHSearch 78.6436% -98 - C6 -3PAJ - ? -
122 HHSearch 75.8038%-100 - C6 -1X1O - ? -
117 HHSearch 74.0437% -91 - C6 -1O4U - ? -
116 HHSearch 73.7431% -95 - C6 -3L0G 2.7 ?
115 HHSearch 73.7434% -99 - C6 -3TQV - ? -
11 PsiBlast_PDB 73.4837% -84 - C6 -3PAJ - ? -
118 HHSearch 73.3836% -91 - C6 -1QAP 3.0 NADC_SALTY
120 HHSearch 73.2834% -86 - C6 -1QPO - NADC_MYCTU -
103 Fugue 73.2334% -85 - C6 -1QPO - NADC_MYCTU -
80 PsiBlast_CBE 72.7931% -90 - C6 -2JBM - NADC_HUMAN -
90 PsiBlast_CBE 70.5134% -81 - C6 -3C2F 2.3 NADC_YEAST
8 PsiBlast_PDB 70.1535% -88 - C6 -1QAP 3.0 NADC_SALTY
87 PsiBlast_CBE 68.3734% -82 - C6 -3C2R 3.5 NADC_YEAST
47 PsiBlast_CBE 67.9835% -87 - C6 -1QAP 3.7 NADC_SALTY
89 PsiBlast_CBE 67.8434% -75 - C6 -3C2O 2.7 NADC_YEAST
20 PsiBlast_PDB 67.8032% -90 - C6 -4I9A 4.2 ?
86 PsiBlast_CBE 67.3634% -76 - C6 -3C2R 2.9 NADC_YEAST
88 PsiBlast_CBE 67.0934% -73 - C6 -3C2V 2.6 NADC_YEAST
81 PsiBlast_CBE 66.7832% -89 - C6 -4I9A 5.0 ?