@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1290: (2015-12-22 )
MEQSHQNLQSQFFIEHILQILPHRYPMLLVDRIIELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EMO_C_15(3ED0)
?
[Raw transfer]




4BB_A_10(3DP3)
?
[Raw transfer]




EMO_A_10(3ED0)
?
[Raw transfer]




2BC_B_11(3DP0)
?
[Raw transfer]




2RB_B_10(3DP1)
?
[Raw transfer]




SCB_A_15(2GLM)
FABZ_HELPY
[Raw transfer]




SAK_A_15(3D04)
?
[Raw transfer]




BDE_A_18(2GLP)
FABZ_HELPY
[Raw transfer]




AGI_A_13(3CF9)
?
[Raw transfer]




3BE_B_14(3DOZ)
?
[Raw transfer]




QUE_A_16(3CF8)
?
[Raw transfer]




JUG_B_12(3B7J)
?
[Raw transfer]




4BE_B_13(3DP2)
?
[Raw transfer]




SAK_C_17(3D04)
?
[Raw transfer]




3BE_C_17(3DOZ)
?
[Raw transfer]




2RB_C_12(3DP1)
?
[Raw transfer]




4BE_C_15(3DP2)
?
[Raw transfer]




4BB_C_16(3DP3)
?
[Raw transfer]




2BE_C_16(3DOY)
?
[Raw transfer]




AGI_C_17(3CF9)
?
[Raw transfer]




QUE_C_20(3CF8)
?
[Raw transfer]




BDE_C_22(2GLP)
FABZ_HELPY
[Raw transfer]




41 PsiBlast_CBE 97.3098%-146 - C4 -3DP0 - ? -
45 PsiBlast_CBE 97.2098%-148 - C4 -3DP0 - ? -
80 PsiBlast_CBE 97.0998%-141 - C4 -2GLP - FABZ_HELPY -
58 PsiBlast_CBE 96.9798%-145 - C4 -3D04 2.9 ?
88 PsiBlast_CBE 96.6598%-145 - C4 -2GLL - FABZ_HELPY -
73 PsiBlast_CBE 96.6298%-144 - C4 -3B7J - ? -
68 PsiBlast_CBE 96.5698%-145 - C4 -3CF8 3.3 ?
90 PsiBlast_CBE 96.4398%-146 - C4 -2GLL - FABZ_HELPY -
59 PsiBlast_CBE 96.4398%-142 - C4 -3D04 - ? -
84 PsiBlast_CBE 96.4198%-138 * C4 *2GLM - FABZ_HELPY -
23 PsiBlast_CBE 96.4098%-146 - C4 -3ED0 Error ?
51 PsiBlast_CBE 96.3898%-146 - C4 -3DOY - ? -
63 PsiBlast_CBE 96.3498%-143 - C4 -3CF9 3.2 ?
97 PsiBlast_CBE 96.3398%-147 - C4 -2GLV - FABZ_HELPY -
56 PsiBlast_CBE 96.3298%-144 - C4 -3D04 - ? -
36 PsiBlast_CBE 96.2798%-149 - C4 -3DP1 - ? -
26 PsiBlast_CBE 96.2798%-148 - C4 -3DP3 - ? -
74 PsiBlast_CBE 96.0898%-142 - C4 -3B7J - ? -
24 PsiBlast_CBE 96.0898%-143 - C4 -3ED0 - ? -
64 PsiBlast_CBE 96.0498%-144 - C4 -3CF9 - ? -
3 PsiBlast_PDB 96.0298%-145 - C4 -3CF9 3.3 ?
78 PsiBlast_CBE 95.5098%-142 - C4 -2GLP 3.5 FABZ_HELPY
1 PsiBlast_PDB 95.1698%-138 - C4 -3B7J 2.7 ?
28 PsiBlast_CBE 95.0898%-142 - C4 -3DP3 4.0 ?
11 PsiBlast_PDB 95.0098%-139 - C4 -3ED0 3.4 ?
7 PsiBlast_PDB 94.9698%-143 - C4 -3DP0 4.4 ?
33 PsiBlast_CBE 94.7798%-142 - C4 -3DP2 3.5 ?
4 PsiBlast_PDB 94.5498%-145 - C4 -3D04 4.3 ?
53 PsiBlast_CBE 94.5298%-142 - C4 -3DOY 3.6 ?
2 PsiBlast_PDB 94.4298%-143 - C4 -3CF8 3.5 ?
14 PsiBlast_PDB 94.3598%-143 - C4 -2GLP 3.8 FABZ_HELPY
13 PsiBlast_PDB 94.3198%-143 - C4 -2GLM 4.5 FABZ_HELPY
48 PsiBlast_CBE 94.2798%-138 - C4 -3DOZ 2.6 ?
6 PsiBlast_PDB 94.0798%-143 - C4 -3DOZ 4.6 ?
9 PsiBlast_PDB 93.9598%-143 - C4 -3DP2 5.5 ?
38 PsiBlast_CBE 93.7098%-142 - C4 -3DP1 3.3 ?
10 PsiBlast_PDB 93.6398%-141 - C4 -3DP3 4.9 ?
8 PsiBlast_PDB 93.2498%-140 - C4 -3DP1 4.9 ?