@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1308: (2015-12-22 )
MTPESNLKSLGAKTPYIFEYNSDLLEAFPNPNPNLDPLITLECKEFTSLCPITSQPDFGVIFIRYIPKDKMVESKSLKLYLFSYRNHGSFHESCINTILLDLVQLLEPKYLEVYGDFVSRGGIAIKPFVNYAIKEYQDFKEKRLLDAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GD1_C_9(4F8B)
QUEF_BACSU
[Raw transfer]




GD1_D_11(4F8B)
QUEF_BACSU
[Raw transfer]




GD1_B_6(4F8B)
QUEF_BACSU
[Raw transfer]




PQ0_D_13(4FGC)
QUEF_BACSU
[Raw transfer]




GD1_E_14(4F8B)
QUEF_BACSU
[Raw transfer]




PQ0_E_16(4FGC)
QUEF_BACSU
[Raw transfer]




PQ0_B_6(4FGC)
QUEF_BACSU
[Raw transfer]




PQ0_C_10(4FGC)
QUEF_BACSU
[Raw transfer]




16 PsiBlast_CBE 95.6555%-124 - C2 -4F8B 5.2 QUEF_BACSU
2 PsiBlast_PDB 95.3154%-122 - C2 -4FGC - QUEF_BACSU -
1 PsiBlast_PDB 95.1255%-122 - C2 -4F8B - QUEF_BACSU -
18 PsiBlast_CBE 94.8955%-123 - C2 -4F8B 4.8 QUEF_BACSU
15 PsiBlast_CBE 94.8655%-127 - C2 -4F8B 4.8 QUEF_BACSU
17 PsiBlast_CBE 94.5655%-128 - C2 -4F8B 5.0 QUEF_BACSU
19 PsiBlast_CBE 93.8954%-126 - C2 -4FGC 2.9 QUEF_BACSU
20 PsiBlast_CBE 93.6354%-121 - C2 -4FGC 3.7 QUEF_BACSU
21 PsiBlast_CBE 93.5454%-124 - C2 -4FGC 5.3 QUEF_BACSU
22 PsiBlast_CBE 93.1854%-121 - C2 -4FGC 5.4 QUEF_BACSU
23 HHSearch 68.3631%-120 - C2 -3UXJ - QUEF_VIBCH -
4 PsiBlast_PDB 65.4938%-150 - C2 -3RJ4 - QUEF_VIBCH -
5 PsiBlast_PDB 63.3938%-132 - C2 -3S19 - QUEF_VIBCH -
14 PsiBlast_PDB 63.0323%-149 - C2 -1N3S - GCH1_ECOLI -
7 PsiBlast_PDB 62.4038%-133 - C2 -4GHM - QUEF_VIBCH -
3 PsiBlast_PDB 62.3139%-133 - C2 -4IQI - QUEF_VIBCH -
34 Fugue 61.2618% -83 - C2 -1A8R - GCH1_ECOLI -
26 HHSearch 61.0322%-148 - C2 -1A8R - GCH1_ECOLI -
6 PsiBlast_PDB 60.5838%-129 - C2 -3UXJ - QUEF_VIBCH -
24 HHSearch 59.5222%-127 - C2 -1WUR - ? -