@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1327: (2015-12-22 )
MLEFILKIQAKDSKGLVSAISATIANKGYNIVKNDEFVDPLKQRFFMRLKIQKEMKPLNTEIKEQEERSLKTALFKALENFSELLIEVILTHKKNIILLATKESHCLGDLLLRVYGGELNAQILGVISNHEILRPLVEKFDIPYFYAPCVDQILHEKEVLATIKDLELKHKVSADLLVLAKYMRILSHDFTKRYENQILNIHHSFLPAFIGANPYQQAFERGVKVIGATAHFVNESLDAGPIILQDTLPINHNYSVEKMRLAGKDIEKLVLARALKLVLEDRVFVHENKTVVF

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KEU_N_14(1RBQ)

[Raw transfer]




KEU_G_7(1NJS)

[Raw transfer]




KT5_D_4(1RC0)

[Raw transfer]




KT5_C_3(1RC0)
PUR2_HUMAN
[Raw transfer]




KEU_E_5(1RBY)
PUR2_HUMAN
[Raw transfer]




KEU_F_6(1NJS)
PUR2_HUMAN
[Raw transfer]




KEU_H_8(1RBY)

[Raw transfer]




KEU_F_6(1RBY)
PUR2_HUMAN
[Raw transfer]




KEU_M_13(1RBQ)
PUR2_HUMAN
[Raw transfer]




KT5_H_8(1RBM)

[Raw transfer]




KEU_L_12(1RBQ)
PUR2_HUMAN
[Raw transfer]




KEU_K_11(1RBQ)
PUR2_HUMAN
[Raw transfer]




KT5_D_4(1RBZ)

[Raw transfer]




KT3_E_5(1RC1)
PUR2_HUMAN
[Raw transfer]




KT5_G_7(1RBM)
PUR2_HUMAN
[Raw transfer]




KT3_F_6(1RC1)

[Raw transfer]




KEU_G_7(1RBY)
PUR2_HUMAN
[Raw transfer]




NHR_E_5(1C3E)
PUR3_ECOLI
[Raw transfer]




DZF_C_10(1CDE)
PUR3_ECOLI
[Raw transfer]




DZF_D_12(1CDE)
PUR3_ECOLI
[Raw transfer]




DZF_B_8(1CDE)
PUR3_ECOLI
[Raw transfer]




DZF_A_6(1CDE)
PUR3_ECOLI
[Raw transfer]




DQB_C_3(1ZLY)

[Raw transfer]




DXY_A_5(4EW2)

[Raw transfer]




DXZ_A_5(4EW3)

[Raw transfer]




FLC_A_7(3NRB)
?
[Raw transfer]




EDO_A_16(3LOU)
?
[Raw transfer]




EDO_A_16(3LOU)
?
[Raw transfer]




80 HHSearch 95.2744%-134 - C5 -3O1L - ? -
1 PsiBlast_PDB 94.4943%-122 - C5 -3O1L - ? -
79 HHSearch 93.0242%-135 - C5 -3W7B - ? -
77 HHSearch 91.0936%-133 - C5 -3LOU 3.2 ?
3 PsiBlast_PDB 90.5640%-123 - C5 -3NRB 2.5 ?
82 HHSearch 89.7938%-125 - C5 -3OBI - ? -
98 Fugue 89.6536%-121 - C5 -3LOU 3.2 ?
4 PsiBlast_PDB 88.8036%-116 - C5 -3OBI - ? -
5 PsiBlast_PDB 88.7634%-122 - C5 -3LOU - ? -
2 PsiBlast_PDB 86.9640%-101 - C5 -3W7B - ? -
89 HHSearch 73.0830%-130 - C5 -2YWR - ? -
86 HHSearch 72.6429%-143 - C5 -3KCQ - ? -
88 HHSearch 71.1127%-138 - C5 -1JKX - PUR3_ECOLI -
84 HHSearch 69.1628%-135 - C5 -3P9X - ? -
87 HHSearch 68.6728%-120 - C5 -3DA8 - PUR3_MYCTU -
36 PsiBlast_CBE 66.6032%-129 * C5 *3KCQ - ? -
90 HHSearch 66.2122%-137 - C5 -3Q0I - FMT_VIBCH -
94 HHSearch 65.9622%-142 - C5 -1FMT - FMT_ECOLI -
7 PsiBlast_PDB 65.7737%-114 - C5 -1MEJ - PUR2_HUMAN -
22 PsiBlast_CBE 65.5937%-108 - C5 -1MEN - PUR2_HUMAN -
26 PsiBlast_CBE 64.9537%-107 - C5 -1RC0 7.1
25 PsiBlast_CBE 64.9537%-110 - C5 -1RC1 8.1
12 PsiBlast_PDB 64.7937%-108 - C5 -1RBQ 8.1 PUR2_HUMAN
33 PsiBlast_CBE 64.6937%-108 - C5 -1RBQ 8.1 PUR2_HUMAN
28 PsiBlast_CBE 64.6637%-108 - C5 -1RBY 7.4
20 PsiBlast_PDB 64.6237%-110 - C5 -1ZLY 7.0
15 PsiBlast_PDB 64.6037%-109 - C5 -1RC0 7.5 PUR2_HUMAN
16 PsiBlast_PDB 64.5737%-108 - C5 -1RC1 7.8 PUR2_HUMAN
27 PsiBlast_CBE 64.4837%-106 - C5 -1RBZ 7.6
34 PsiBlast_CBE 64.2637%-109 - C5 -1RBM 8.3
31 PsiBlast_CBE 64.2437%-106 - C5 -1RBQ 7.6
32 PsiBlast_CBE 64.2337%-109 - C5 -1RBQ 7.7 PUR2_HUMAN
11 PsiBlast_PDB 64.1537%-105 - C5 -1RBM 8.0 PUR2_HUMAN
35 PsiBlast_CBE 64.0437%-109 - C5 -1NJS 7.7
13 PsiBlast_PDB 63.9737%-107 - C5 -1RBY 8.1 PUR2_HUMAN
19 PsiBlast_PDB 63.8037%-108 - C5 -4EW3 5.8
29 PsiBlast_CBE 63.6837%-107 - C5 -1RBY 6.9 PUR2_HUMAN
10 PsiBlast_PDB 63.6337%-104 - C5 -1NJS 8.0 PUR2_HUMAN
30 PsiBlast_CBE 63.4337%-109 - C5 -1RBY 8.0 PUR2_HUMAN
18 PsiBlast_PDB 63.1237%-109 - C5 -4EW2 5.9
49 PsiBlast_CBE 61.4735%-114 - C5 -1CDE 6.4 PUR3_ECOLI
47 PsiBlast_CBE 61.4235%-114 - C5 -1CDE 6.2 PUR3_ECOLI
50 PsiBlast_CBE 61.2135%-114 - C5 -1CDE 6.3 PUR3_ECOLI
48 PsiBlast_CBE 61.1035%-114 - C5 -1CDE 6.2 PUR3_ECOLI
55 PsiBlast_CBE 59.6135%-112 - C5 -1C3E 7.7 PUR3_ECOLI