@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1489: (2015-12-24 )
MRFGLNIDHIVTLREVRKTYEPEILEALFIAKNTHKVDLITIHLREDKRHIQNEDVLRLLEISPLPINIECSINAEITDFLCSLKNKPSKVTIVPENRNEVTTEGGLDCSLKGLEEVIRAYHNKGIEVSLFVDPLKDALHFAKEHQVKQVEFHTGVYANLHNALYSNANNQIHAISTLKDKCPKELKEELHNAFLQLRRMSKEAFFMGIVVCAGHGLNYSNVKELLKIPSLRELNIGHSVVSKAVLVGLEKAILEMAQLIKR

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PXP_Q_17(1HO4)
PDXJ_ECOLI
[Raw transfer]




DXP_I_9(1IXN)
PDXJ_ECOLI
[Raw transfer]




DXP_K_11(1IXN)
PDXJ_ECOLI
[Raw transfer]




PXP_O_15(1HO4)
PDXJ_ECOLI
[Raw transfer]




PXP_S_19(1HO4)
PDXJ_ECOLI
[Raw transfer]




DXP_M_13(1IXN)
PDXJ_ECOLI
[Raw transfer]




PXP_A_2(3O6D)
PDXJ_CAMJE
[Raw transfer]




DXP_O_15(1IXN)
PDXJ_ECOLI
[Raw transfer]




G3P_Q_17(1IXO)
PDXJ_ECOLI
[Raw transfer]




PXP_U_21(1HO4)
PDXJ_ECOLI
[Raw transfer]




G3P_I_9(1IXO)
PDXJ_ECOLI
[Raw transfer]




G3P_O_15(1IXO)
PDXJ_ECOLI
[Raw transfer]




G3P_K_11(1IXO)
PDXJ_ECOLI
[Raw transfer]




2 PsiBlast_PDB 96.0743%-113 - C10 -3O6D 3.9 PDXJ_CAMJE
1 PsiBlast_PDB 95.8543%-111 - C10 -3O6C - PDXJ_CAMJE -
54 HHSearch 94.7845%-107 - C10 -3O6C - PDXJ_CAMJE -
75 Fugue 92.5838%-125 * C10 *1HO1 - PDXJ_ECOLI -
3 PsiBlast_PDB 90.8737%-117 - C10 -1HO1 - PDXJ_ECOLI -
8 PsiBlast_PDB 90.7837%-118 - C10 -1IXQ - PDXJ_ECOLI -
55 HHSearch 90.2939%-112 - C10 -1M5W - PDXJ_ECOLI -
20 PsiBlast_CBE 90.2737%-114 - C10 -1IXQ - PDXJ_ECOLI -
28 PsiBlast_CBE 90.0937%-113 - C10 -1IXO 2.9 PDXJ_ECOLI
21 PsiBlast_CBE 90.0537%-117 - C10 -1IXQ - PDXJ_ECOLI -
6 PsiBlast_PDB 89.8437%-115 - C10 -1IXO 3.3 PDXJ_ECOLI
38 PsiBlast_CBE 89.4737%-104 - C10 -1M5W - PDXJ_ECOLI -
26 PsiBlast_CBE 89.4337%-115 - C10 -1IXO 2.7 PDXJ_ECOLI
27 PsiBlast_CBE 89.4037%-117 - C10 -1IXO 3.7 PDXJ_ECOLI
7 PsiBlast_PDB 89.3837%-109 - C10 -1IXP - PDXJ_ECOLI -
22 PsiBlast_CBE 89.3437%-111 - C10 -1IXQ - PDXJ_ECOLI -
32 PsiBlast_CBE 89.0037%-113 - C10 -1HO4 4.1 PDXJ_ECOLI
46 PsiBlast_CBE 88.7935%-119 - C10 -3F4N - PDXJ_YERPE -
31 PsiBlast_CBE 88.7337%-107 - C10 -1IXN 3.0 PDXJ_ECOLI
35 PsiBlast_CBE 88.6537%-108 - C10 -1M5W - PDXJ_ECOLI -
5 PsiBlast_PDB 88.5337%-110 - C10 -1IXN 3.6 PDXJ_ECOLI
30 PsiBlast_CBE 87.8737%-110 - C10 -1IXN 3.0 PDXJ_ECOLI
34 PsiBlast_CBE 87.8337%-108 - C10 -1HO4 3.1 PDXJ_ECOLI
4 PsiBlast_PDB 87.7337%-108 - C10 -1HO4 4.7 PDXJ_ECOLI
29 PsiBlast_CBE 87.3637%-109 - C10 -1IXN 2.7 PDXJ_ECOLI
33 PsiBlast_CBE 86.9637%-109 - C10 -1HO4 4.8 PDXJ_ECOLI