@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1491: (2015-12-24 )
MILSIESSCDDSSLALTRIEDAKLIAHFKISQEKHHSSYGGVVPEIASRLHAENLPLLLERVKISLNKDFSKIKAIAITNQPGLSVTLIEGLMMAKALSLSLNLPLILEDHLRGHVYSLFINEKQTRMPLSVLLVSGGHSLILEARDYEDIKIVATSLDDSFGESFDKVSKMLDLGYPGGPIVEKLALDYAHPNEPLMFPIPLKNSPNLAFSFSGLKNAVRLEVEKNAHNLNDEVKQKIGYHFQSAAIEHLIQQTKRYFKIKRPKIFGIVGGASQNLALRKAFEDLCAEFDCELVLAPLEFCSDNAAMIGRSSLEAYQKKRFIPLEKADISPRTLLKNFE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_10(3ZEU)
?
[Raw transfer]




AGS_E_16(3ZEU)
?
[Raw transfer]




ADP_A_5(4YDU)
TSAD_ECOLI
[Raw transfer]




ATP_A_6(4WQ4)
TSAD_ECOLI
[Raw transfer]




AGS_B_10(3ZEU)
?
[Raw transfer]




ADP_B_12(4YDU)
TSAD_ECOLI
[Raw transfer]




ATP_A_7(4WQ5)
TSAD_ECOLI
[Raw transfer]




18 PsiBlast_CBE 90.0133% -99 - C4 -3ZEU 6.5 ?
2 PsiBlast_PDB 89.8633% -96 - C4 -3ZEU 7.3 ?
1 PsiBlast_PDB 89.3133% -99 - C4 -3ZET - ? -
4 PsiBlast_PDB 89.1534% -93 - C4 -4YDU 6.2 TSAD_ECOLI
26 HHSearch 89.0431% -85 - C4 -3ZEU 6.3 ?
20 PsiBlast_CBE 88.8734% -92 - C4 -4YDU 6.1 TSAD_ECOLI
21 PsiBlast_CBE 88.2734% -94 - C4 -4WQ4 - TSAD_ECOLI -
5 PsiBlast_PDB 88.1334% -94 - C4 -4WQ4 5.4 TSAD_ECOLI
3 PsiBlast_PDB 87.7234% -97 - C4 -4WQ5 6.7 TSAD_ECOLI
19 PsiBlast_CBE 86.7534% -93 - C4 -4WQ5 - TSAD_ECOLI -
6 PsiBlast_PDB 85.4129% -93 - C4 -3WUH - QRI7_YEAST -
47 Fugue 83.9825% -88 - C4 -2IVN - KAE1_PYRAB -
28 HHSearch 81.7625% -91 - C4 -2IVN - KAE1_PYRAB -
11 PsiBlast_PDB 81.2825% -94 - C4 -3ENO - KAE1B_THEAC -
27 HHSearch 79.8226% -91 * C4 *3EN9 - KAE1B_METJA -
8 PsiBlast_PDB 78.7626% -91 - C4 -2IVN - KAE1_PYRAB -
9 PsiBlast_PDB 78.6226% -90 - C4 -2IVO - KAE1_PYRAB -
10 PsiBlast_PDB 77.5226% -92 - C4 -2IVP - KAE1_PYRAB -
7 PsiBlast_PDB 76.4627% -97 - C4 -3EN9 - KAE1B_METJA -
30 HHSearch 60.6117% -85 - C4 -3VTH - ? -