@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0198: (2016-03-13 )
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQDEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIEPGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPEDALGIARAKQDNKLGYAKHLNHSK

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_4(3DJ4)
GLMU_MYCTU
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_14(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_B_11(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_B_13(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_7(4G3P)
?
[Raw transfer]




UD1_A_2(3D8V)
GLMU_MYCTU
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(4G87)
GLMU_MYCTU
[Raw transfer]




UD1_A_2(4G3S)
GLMU_MYCTU
[Raw transfer]




1SG_A_12(4KQL)
GLMU_HAEIN
[Raw transfer]




UD1_V_22(1FWY)
GLMU_ECOLI
[Raw transfer]




UD1_A_8(3ST8)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(3SPT)
GLMU_MYCTU
[Raw transfer]




UD1_A_12(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_2(2V0I)
GLMU_HAEIN
[Raw transfer]




UD1_S_19(1FWY)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




1SE_A_12(4KPX)
GLMU_HAEIN
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




1S8_A_2(4KNR)
GLMU_HAEIN
[Raw transfer]




1S9_A_2(4KNX)
GLMU_HAEIN
[Raw transfer]




ATP_A_2(4K6R)
GLMU_MYCTO
[Raw transfer]




LZS_A_2(2W0W)
GLMU_HAEIN
[Raw transfer]




0N5_A_6(4E1K)
GLMU_HAEIN
[Raw transfer]




LZR_A_2(2W0V)
GLMU_HAEIN
[Raw transfer]




URI_A_2(2V0L)
GLMU_HAEIN
[Raw transfer]




1SF_A_2(4KPZ)
GLMU_HAEIN
[Raw transfer]




UDP_A_2(2V0K)
GLMU_HAEIN
[Raw transfer]




H2U_A_2(2V0J)
GLMU_HAEIN
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




POP_A_4(4G3S)
GLMU_MYCTU
[Raw transfer]




POP_A_7(4G87)
GLMU_MYCTU
[Raw transfer]




GN1_A_3(4HCQ)
GLMU_MYCTU
[Raw transfer]




GN1_A_2(2QKX)
GLMU_MYCTU
[Raw transfer]




EDO_Y_25(1FWY)
GLMU_ECOLI
[Raw transfer]




6 PsiBlast_PDB 96.1354%-109 - C1 -4AAW - GLMU_STRR6 -
7 PsiBlast_PDB 96.0754%-110 - C1 -4AC3 - GLMU_STRR6 -
2 PsiBlast_PDB 96.0354%-109 - C1 -1HM8 - GLMU_STRPN -
22 PsiBlast_CBE 95.5054%-108 - C1 -1HM8 - GLMU_STRPN -
23 PsiBlast_CBE 95.3554%-112 - C1 -1HM0 - GLMU_STRPN -
3 PsiBlast_PDB 94.3854%-112 - C1 -1HM0 - GLMU_STRPN -
4 PsiBlast_PDB 94.0454%-108 - C1 -1G95 - GLMU_STRPN -
5 PsiBlast_PDB 93.9654%-107 - C1 -1G97 8.7 GLMU_STRPN
21 PsiBlast_CBE 93.4054%-102 - C1 -1HM9 8.2 GLMU_STRPN
70 HHSearch 93.2355%-102 - C1 -1HM9 8.3 GLMU_STRPN
1 PsiBlast_PDB 92.9354%-104 - C1 -1HM9 8.3 GLMU_STRPN
92 Fugue 92.8954%-102 - C1 -1HM9 8.3 GLMU_STRPN
29 PsiBlast_CBE 89.0941%-107 - C1 -4E1K 5.6 GLMU_HAEIN
28 PsiBlast_CBE 89.0241%-106 - C1 -4KNR 6.6 GLMU_HAEIN
26 PsiBlast_CBE 88.8241%-106 - C1 -4KPX 5.7 GLMU_HAEIN
27 PsiBlast_CBE 88.8041%-105 - C1 -4KNX 6.8 GLMU_HAEIN
30 PsiBlast_CBE 88.2241%-105 - C1 -2W0W 8.0 GLMU_HAEIN
69 HHSearch 88.2141%-104 - C1 -2V0H - GLMU_HAEIN -
24 PsiBlast_CBE 87.9441%-104 - C1 -4KQL 6.8 GLMU_HAEIN
19 PsiBlast_PDB 87.8441%-105 - C1 -2V0H - GLMU_HAEIN -
31 PsiBlast_CBE 87.7641%-104 - C1 -2W0V 6.3 GLMU_HAEIN
33 PsiBlast_CBE 87.6841%-106 - C1 -2V0L 3.5 GLMU_HAEIN
35 PsiBlast_CBE 87.6441%-104 - C1 -2V0J 3.1 GLMU_HAEIN
25 PsiBlast_CBE 87.4541%-104 - C1 -4KPZ 4.9 GLMU_HAEIN
34 PsiBlast_CBE 87.1641%-105 - C1 -2V0K 3.4 GLMU_HAEIN
20 PsiBlast_PDB 86.2841%-104 - C1 -2V0I 5.5 GLMU_HAEIN
38 PsiBlast_CBE 83.4340% -97 - C1 -2OI7 6.1 GLMU_ECOLI
44 PsiBlast_CBE 82.9840% -98 - C1 -1HV9 5.9 GLMU_ECOLI
41 PsiBlast_CBE 82.6740% -96 - C1 -2OI5 7.6 GLMU_ECOLI
93 Fugue 82.6440% -96 - C1 -1HV9 5.9 GLMU_ECOLI
40 PsiBlast_CBE 82.5940% -97 - C1 -2OI6 6.0 GLMU_ECOLI
14 PsiBlast_PDB 82.4340%-105 - C1 -4HCQ 3.2 GLMU_MYCTU
39 PsiBlast_CBE 82.4140% -96 - C1 -2OI6 8.0 GLMU_ECOLI
12 PsiBlast_PDB 82.1040%-103 - C1 -3ST8 5.2 GLMU_MYCTU
15 PsiBlast_PDB 81.8240%-106 - C1 -4G3P 7.0 ?
16 PsiBlast_PDB 81.7740%-103 - C1 -4G3Q 6.4 GLMU_MYCTU
11 PsiBlast_PDB 81.7740%-103 - C1 -3SPT 5.0 GLMU_MYCTU
37 PsiBlast_CBE 81.7640% -94 - C1 -2OI7 7.3 GLMU_ECOLI
18 PsiBlast_PDB 81.5240%-101 - C1 -4K6R 6.7 GLMU_MYCTO
42 PsiBlast_CBE 81.4640% -96 - C1 -2OI5 6.3 GLMU_ECOLI
43 PsiBlast_CBE 81.4240% -95 - C1 -1HV9 7.8 GLMU_ECOLI
8 PsiBlast_PDB 81.3740%-101 - C1 -3D8V 5.2 GLMU_MYCTU
17 PsiBlast_PDB 80.4340%-104 - C1 -4G3S 6.1 GLMU_MYCTU
13 PsiBlast_PDB 80.3440%-106 - C1 -4G87 6.4 GLMU_MYCTU
10 PsiBlast_PDB 79.1240%-101 - C1 -3DJ4 6.6 GLMU_MYCTU
45 PsiBlast_CBE 72.9840%-103 - C1 -2QKX 3.0 GLMU_MYCTU
49 PsiBlast_CBE 70.0135%-103 - C1 -1FWY 5.6 GLMU_ECOLI
48 PsiBlast_CBE 69.0935%-100 - C1 -1FWY 5.6 GLMU_ECOLI
94 Fugue 68.7735%-100 - C1 -1FXJ 2.8 GLMU_ECOLI
47 PsiBlast_CBE 67.3835%-100 - C1 -1FXJ 2.8 GLMU_ECOLI
95 Fugue 67.0454%-102 - C1 -1G97 8.5 GLMU_STRPN