@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0219: (2016-03-13 )
MDDTEKRVHKYIEKHDLIRSDDKLLVAVSGGPDSLALLHFLWNSNLVPKEAISVAHLNHQLRENAAKEQRVVETFCERQGIPFYIEEVDIKSRAQSLQKGLEETARIVRYDFFEKVMAEKNINKLVLAHHADDQIETILMRLVRGSASIGWSGIQPKRELKGGQAIRPFLPITKAEIIDYAQKHELAYEIDESNTSQEYTRNRYRAQLLPFLKQENPAVYSHFERFSEETSEDFQFLEALASDLLKKNLIKNGKQTTLLLSSFKNEANPLQRRAIHLLLRYLYNEDASFITVNHIYQIIQMIQSDNPSSSIDLPNKLIANRAYDKLHFQFGEREAPSEFYHQLELNDRIELDNKASIRLKLKSSVVQTNGLNGMLLDAEEITLPLIVRNRVNGDRMTMKGQAGSKKLKDIFIDAKIPRQERDKLPVITDYTGKILWVPGVKKSAYDREFSRSKKQYIIRYTRNIGGNESMHNDIQKVLISEDELQEKIRELGRELTTEYEGRNPLVVGVLKGATPFMTDLLKRVDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLVIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEADYVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIYSE

Atome Classification :

(91 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3QF_C_11(4RHX)
?
[Raw transfer]




3QG_A_7(4RHY)
?
[Raw transfer]




3QG_C_13(4RHY)
?
[Raw transfer]




3QF_D_14(4RHX)
?
[Raw transfer]




3QF_A_5(4RHX)
?
[Raw transfer]




3QG_D_16(4RHY)
?
[Raw transfer]




3QF_B_8(4RHX)
?
[Raw transfer]




3QG_B_10(4RHY)
?
[Raw transfer]




3QE_A_7(4RHU)
?
[Raw transfer]




45T_F_18(4RHU)
?
[Raw transfer]




IMP_H_8(1P17)
?
[Raw transfer]




45T_C_12(4RHU)
?
[Raw transfer]




3QE_B_9(4RHU)
?
[Raw transfer]




3L7_D_14(4RAO)
HPRT_HUMAN
[Raw transfer]




3L8_A_5(4RAQ)
HPRT_HUMAN
[Raw transfer]




45T_D_14(4RHU)
?
[Raw transfer]




IMP_H_8(1P19)
?
[Raw transfer]




3L7_A_5(4RAO)
HPRT_HUMAN
[Raw transfer]




3L8_C_11(4RAQ)
HPRT_HUMAN
[Raw transfer]




3L7_C_11(4RAO)
HPRT_HUMAN
[Raw transfer]




PRP_B_10(1TC2)
?
[Raw transfer]




PRP_B_10(1P18)
?
[Raw transfer]




5GP_B_15(3KB8)
?
[Raw transfer]




PRP_B_10(1I14)
?
[Raw transfer]




PRP_B_10(1I13)
?
[Raw transfer]




PRP_B_9(1I0L)
?
[Raw transfer]




PRP_B_10(1I0I)
?
[Raw transfer]




3L8_D_14(4RAQ)
HPRT_HUMAN
[Raw transfer]




5GP_A_2(3ACC)
?
[Raw transfer]




5GP_E_5(1G9T)
HPRT_ECOLI
[Raw transfer]




IMP_F_6(1P17)
?
[Raw transfer]




IMP_A_2(3ACD)
?
[Raw transfer]




IMP_A_2(3ACD)
?
[Raw transfer]




IMP_E_5(1P19)
?
[Raw transfer]




5GP_B_4(1PZM)
?
[Raw transfer]




IMP_F_6(1P19)
?
[Raw transfer]




IMP_G_7(1P19)
?
[Raw transfer]




IMP_G_7(1P17)
?
[Raw transfer]




5GP_D_4(1HGX)
HGXR_TRIFO
[Raw transfer]




IMP_E_5(1P17)
?
[Raw transfer]




45T_E_16(4RHU)
?
[Raw transfer]




GOL_C_12(3O7M)
?
[Raw transfer]




5GP_D_4(1HGX)
HGXR_TRIFO
[Raw transfer]




5GP_A_3(1PZM)
?
[Raw transfer]




3L6_D_11(4RAN)
HPRT_HUMAN
[Raw transfer]




IMP_E_5(1G9S)
HPRT_ECOLI
[Raw transfer]




GOL_A_5(3O7M)
?
[Raw transfer]




5GP_A_3(1PZM)
?
[Raw transfer]




5GP_D_4(1HGX)
HGXR_TRIFO
[Raw transfer]




PRP_A_9(1I0I)
?
[Raw transfer]




PRP_A_9(1I14)
?
[Raw transfer]




5GP_A_9(3KB8)
?
[Raw transfer]




PRP_A_9(1I13)
?
[Raw transfer]




PRP_A_9(1TC2)
?
[Raw transfer]




3L6_C_9(4RAN)
HPRT_HUMAN
[Raw transfer]




PRP_A_9(1P18)
?
[Raw transfer]




3L7_B_8(4RAO)
HPRT_HUMAN
[Raw transfer]




IMP_B_10(1YFZ)
?
[Raw transfer]




PRP_A_8(1I0L)
?
[Raw transfer]




IMP_A_9(1YFZ)
?
[Raw transfer]




IMP_A_9(1YFZ)
?
[Raw transfer]




MES_B_7(3HVU)
?
[Raw transfer]




MES_A_5(3HVU)
?
[Raw transfer]




MES_A_5(3HVU)
?
[Raw transfer]




MES_C_9(3HVU)
?
[Raw transfer]




GOL_A_7(4RQB)
?
[Raw transfer]




MES_D_11(3HVU)
?
[Raw transfer]




EPE_B_12(4QYI)
?
[Raw transfer]




EPE_C_16(4QYI)
?
[Raw transfer]




FMB_D_4(1TC1)
?
[Raw transfer]




SUC_B_10(3H83)
?
[Raw transfer]




7HP_B_8(1TC2)
?
[Raw transfer]




FMB_C_3(1TC1)
?
[Raw transfer]




FMB_C_3(1TC1)
?
[Raw transfer]




5GP_A_6(4RHT)
?
[Raw transfer]




5GP_B_10(4RHT)
?
[Raw transfer]




SUC_A_6(3H83)
?
[Raw transfer]




POP_A_6(3OZF)
?
[Raw transfer]




5GP_D_18(4RHT)
?
[Raw transfer]




5GP_C_14(4RHT)
?
[Raw transfer]




N_F_6(1G9S)
HPRT_ECOLI
[Raw transfer]




N_F_6(1G9T)
HPRT_ECOLI
[Raw transfer]




SUC_C_21(3KB8)
?
[Raw transfer]




BME_D_19(3O7M)
?
[Raw transfer]




SUC_D_25(3KB8)
?
[Raw transfer]




1 PsiBlast_PDB 80.5439% -79 - C1 -3A2K - TILS_GEOKA -
101 HHSearch 79.9339% -75 * C1 *3A2K - TILS_GEOKA -
104 HHSearch 73.0770%-111 - C2 -3HVU 2.3 ?
23 PsiBlast_CBE 72.9571%-117 - C2 -3KB8 5.7 ?
2 PsiBlast_PDB 72.9371%-117 - C2 -3H83 3.0 ?
3 PsiBlast_PDB 72.6071%-111 - C2 -3HVU 2.3 ?
25 PsiBlast_CBE 71.9271%-112 - C2 -3HVU 2.0 ?
4 PsiBlast_PDB 71.8271%-119 - C2 -3KB8 5.5 ?
29 PsiBlast_CBE 71.7271%-111 - C2 -3H83 4.4 ?
26 PsiBlast_CBE 71.5971%-113 - C2 -3HVU 2.0 ?
21 PsiBlast_CBE 71.3471%-109 - C2 -3KB8 1.8 ?
24 PsiBlast_CBE 71.2471%-109 - C2 -3HVU 2.3 ?
27 PsiBlast_CBE 71.2071%-110 - C2 -3H83 - ? -
28 PsiBlast_CBE 70.7871%-109 - C2 -3H83 - ? -
22 PsiBlast_CBE 70.1671%-108 - C2 -3KB8 2.5 ?
112 HHSearch 69.1853%-113 - C2 -2GEB - ? -
6 PsiBlast_PDB 68.6156%-115 - C2 -4RQB 2.6 ?
113 HHSearch 68.4854%-110 - C2 -1YFZ 5.2 ?
5 PsiBlast_PDB 68.4556%-115 - C2 -4RQA - ? -
9 PsiBlast_PDB 68.3553%-114 - C2 -2GEB - ? -
55 PsiBlast_CBE 68.3242%-108 - C2 -1P18 6.6 ?
8 PsiBlast_PDB 68.0852%-110 - C2 -1YFZ 5.2 ?
30 PsiBlast_CBE 67.7052%-111 - C2 -1YFZ 5.5 ?
47 PsiBlast_CBE 67.6742%-109 - C2 -1TC2 6.9 ?
81 PsiBlast_CBE 67.2842%-109 - C2 -1I0L 6.7 ?
85 PsiBlast_CBE 67.2442%-110 - C2 -1I13 7.0 ?
58 PsiBlast_CBE 67.1942%-110 - C2 -1P17 4.1 ?
66 PsiBlast_CBE 66.8546%-114 - C2 -4RHX 8.3 ?
52 PsiBlast_CBE 66.8342%-108 - C2 -1P19 3.8 ?
62 PsiBlast_CBE 66.7746%-113 - C2 -4RHY 7.4 ?
64 PsiBlast_CBE 66.6646%-113 - C2 -4RHY 7.9 ?
79 PsiBlast_CBE 66.5942%-110 - C2 -1I14 6.5 ?
42 PsiBlast_CBE 66.4047%-104 - C2 -4QYI 2.0 ?
80 PsiBlast_CBE 66.3942%-108 - C2 -1I14 4.1 ?
63 PsiBlast_CBE 66.3346%-112 - C2 -4RHY 8.1 ?
83 PsiBlast_CBE 66.2742%-107 - C2 -1I0I 6.9 ?
53 PsiBlast_CBE 66.1542%-107 - C2 -1TC1 4.0 ?
84 PsiBlast_CBE 66.0842%-109 - C2 -1I0I 4.3 ?
86 PsiBlast_CBE 66.0542%-113 - C2 -1I13 3.3 ?
82 PsiBlast_CBE 65.9842%-106 - C2 -1I0L 2.9 ?
60 PsiBlast_CBE 65.7442%-111 - C2 -1P17 4.7 ?
68 PsiBlast_CBE 65.6846%-113 - C2 -4RHX 9.1 ?
56 PsiBlast_CBE 65.5342%-109 - C2 -1P18 3.7 ?
59 PsiBlast_CBE 65.5142%-106 - C2 -1P17 6.3 ?
74 PsiBlast_CBE 65.4446%-108 - C2 -4RHU 5.7 ?
50 PsiBlast_CBE 65.4442%-113 - C2 -1P19 4.9 ?
12 PsiBlast_PDB 65.4047%-111 - C2 -3O7M 2.1 ?
32 PsiBlast_CBE 65.3547%-113 - C2 -3O7M Error ?
14 PsiBlast_PDB 65.3548%-108 - C2 -1HGX 6.6 HGXR_TRIFO
110 HHSearch 65.3147%-112 - C2 -1HGX 6.6 HGXR_TRIFO
57 PsiBlast_CBE 65.2542%-110 - C2 -1P17 5.9 ?
111 HHSearch 65.1641%-116 - C2 -1TC1 3.2 ?
48 PsiBlast_CBE 65.1542%-111 - C2 -1TC2 4.3 ?
61 PsiBlast_CBE 65.0646%-110 - C2 -4RHY 7.5 ?
33 PsiBlast_CBE 64.9747%-113 - C2 -3O7M 3.9 ?
69 PsiBlast_CBE 64.8946%-114 - C2 -4RHU 5.9 ?
125 Fugue 64.8348%-107 - C2 -1HGX 6.6 HGXR_TRIFO
43 PsiBlast_CBE 64.8347%-104 - C2 -4QYI 2.3 ?
72 PsiBlast_CBE 64.4746%-109 - C2 -4RHU 6.1 ?
73 PsiBlast_CBE 64.4446%-110 - C2 -4RHU 6.1 ?
67 PsiBlast_CBE 64.4146%-117 - C2 -4RHX 8.5 ?
78 PsiBlast_CBE 64.2346%-113 - C2 -4RHT 3.3 ?
45 PsiBlast_CBE 64.1447%-121 - C2 -3ACD 6.1 ?
37 PsiBlast_CBE 64.0348%-113 - C2 -1G9T 3.3 HPRT_ECOLI
77 PsiBlast_CBE 63.7446%-114 - C2 -4RHT 3.1 ?
49 PsiBlast_CBE 63.4942%-111 - C2 -1P19 5.0 ?
106 HHSearch 63.1944%-113 - C2 -3ACD 6.1 ?
54 PsiBlast_CBE 63.0442%-111 - C2 -1TC1 3.2 ?
51 PsiBlast_CBE 62.6542%-104 - C2 -1P19 5.7 ?
46 PsiBlast_CBE 62.6247%-119 - C2 -3ACC 6.4 ?
65 PsiBlast_CBE 62.4846%-109 - C2 -4RHX 8.4 ?
71 PsiBlast_CBE 62.4646%-107 - C2 -4RHU 5.8 ?
76 PsiBlast_CBE 62.4446%-103 - C2 -4RHT 3.6 ?
70 PsiBlast_CBE 61.8346%-111 - C2 -4RHU 6.2 ?
16 PsiBlast_PDB 61.6048%-113 - C2 -1G9T 5.8 HPRT_ECOLI
38 PsiBlast_CBE 61.4448%-110 - C2 -1G9S 3.0 HPRT_ECOLI
75 PsiBlast_CBE 61.1346%-109 - C2 -4RHT 5.2 ?
109 HHSearch 60.9530%-100 - C2 -3OZF 3.3 ?
90 PsiBlast_CBE 59.9736%-125 - C2 -1PZM 6.2 ?
15 PsiBlast_PDB 59.7248%-113 - C2 -1G9S 5.1 HPRT_ECOLI
108 HHSearch 59.2534%-115 - C2 -1PZM 6.2 ?
94 PsiBlast_CBE 58.6834%-110 - C2 -4RAQ 6.4 HPRT_HUMAN
99 PsiBlast_CBE 58.4634%-112 - C2 -4RAN 5.9 HPRT_HUMAN
95 PsiBlast_CBE 57.6934%-107 - C2 -4RAO 6.4 HPRT_HUMAN
98 PsiBlast_CBE 57.6234%-112 - C2 -4RAO 7.8 HPRT_HUMAN
89 PsiBlast_CBE 57.1936%-130 - C2 -1PZM 7.0 ?
97 PsiBlast_CBE 56.7834%-110 - C2 -4RAO 6.5 HPRT_HUMAN
96 PsiBlast_CBE 56.4034%-106 - C2 -4RAO 7.5 HPRT_HUMAN
91 PsiBlast_CBE 55.3834%-111 - C2 -4RAQ 6.8 HPRT_HUMAN
92 PsiBlast_CBE 55.2034%-111 - C2 -4RAQ 5.3 HPRT_HUMAN
100 PsiBlast_CBE 54.8534%-108 - C2 -4RAN 5.5 HPRT_HUMAN