@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0224: (2016-03-13 )
LKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQYDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVLGTTPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HH2_B_5(3TZF)
?
[Raw transfer]




HH2_A_3(3TZF)
?
[Raw transfer]




PMM_A_3(1EYE)
DHPS1_MYCTU
[Raw transfer]




B57_A_3(3H2A)
?
[Raw transfer]




2PH_C_3(1AJ2)
DHPS_ECOLI
[Raw transfer]




PMM_A_3(1EYE)
DHPS1_MYCTU
[Raw transfer]




0HY_A_7(4D8A)
?
[Raw transfer]




0J5_B_8(4DAI)
?
[Raw transfer]




78H_B_8(3TYA)
?
[Raw transfer]




680_P_16(1TX2)
?
[Raw transfer]




PT1_O_15(1TX0)
?
[Raw transfer]




XTZ_A_3(3TYE)
?
[Raw transfer]




0J2_A_7(4D8Z)
?
[Raw transfer]




PT1_P_16(1TX0)
?
[Raw transfer]




Z17_B_14(4D9P)
?
[Raw transfer]




HH2_D_4(2DZB)
?
[Raw transfer]




0J2_B_13(4D8Z)
?
[Raw transfer]




680_O_15(1TX2)
?
[Raw transfer]




B57_B_7(3H2A)
?
[Raw transfer]




Z17_A_8(4D9P)
?
[Raw transfer]




0J5_A_3(4DAI)
?
[Raw transfer]




PMM_N_14(1TWZ)
?
[Raw transfer]




Z25_A_3(4DB7)
?
[Raw transfer]




78H_A_3(3TYA)
?
[Raw transfer]




PMM_A_2(2BMB)
FOL1_YEAST
[Raw transfer]




PMM_A_4(2VEG)
DHPS_STRR6
[Raw transfer]




B55_A_3(3H24)
?
[Raw transfer]




B53_A_3(3H22)
?
[Raw transfer]




PT1_A_5(3TR9)
?
[Raw transfer]




B52_A_3(3H21)
?
[Raw transfer]




78H_B_16(2Y5S)
?
[Raw transfer]




B55_B_9(3H24)
?
[Raw transfer]




XHP_A_4(3TYD)
?
[Raw transfer]




78H_A_3(2Y5S)
?
[Raw transfer]




B60_A_3(3H2F)
?
[Raw transfer]




B63_A_3(3H2O)
?
[Raw transfer]




PH2_C_3(1AJ0)
DHPS_ECOLI
[Raw transfer]




78H_A_3(2Y5S)
?
[Raw transfer]




XHP_B_8(3TYB)
?
[Raw transfer]




XHP_B_10(3TYC)
?
[Raw transfer]




XHP_B_12(3TYD)
?
[Raw transfer]




B62_A_3(3H2N)
?
[Raw transfer]




PT1_A_3(3TYU)
?
[Raw transfer]




XHP_A_3(3TYB)
?
[Raw transfer]




PH2_C_3(1AJ0)
DHPS_ECOLI
[Raw transfer]




B61_B_8(3H2M)
?
[Raw transfer]




B56_A_3(3H26)
?
[Raw transfer]




B61_A_3(3H2M)
?
[Raw transfer]




XHP_A_3(3TYZ)
?
[Raw transfer]




XHP_B_7(3TYZ)
?
[Raw transfer]




B54_A_3(3H23)
?
[Raw transfer]




B62_B_8(3H2N)
?
[Raw transfer]




B58_B_9(3H2C)
?
[Raw transfer]




POP_A_3(3TYD)
?
[Raw transfer]




POP_B_11(3TYD)
?
[Raw transfer]




19 PsiBlast_PDB 92.7559%-105 - C8 -3TYD 4.1 ?
26 PsiBlast_CBE 91.5259%-106 - C8 -4NHV - ? -
42 PsiBlast_CBE 91.4459%-105 - C8 -3H2E - ? -
36 PsiBlast_CBE 91.1159%-108 - C8 -3TYD 3.9 ?
37 PsiBlast_CBE 90.4959%-103 - C8 -3TYC 3.1 ?
12 PsiBlast_PDB 90.3459% -97 - C8 -3H2E - ? -
46 PsiBlast_CBE 90.1659%-104 - C8 -1TX2 3.0 ?
25 PsiBlast_CBE 90.1559% -93 - C8 -4NIL - ? -
17 PsiBlast_PDB 90.1059%-101 - C8 -3TYA 4.8 ?
6 PsiBlast_PDB 89.9059%-100 - C8 -3H21 2.4 ?
5 PsiBlast_PDB 89.8459%-101 - C8 -1TX2 3.4 ?
13 PsiBlast_PDB 89.8259%-100 - C8 -3H2F 3.5 ?
33 PsiBlast_CBE 89.8159%-103 - C8 -4D8Z 3.9 ?
11 PsiBlast_PDB 89.7959%-105 - C8 -3H2A 3.2 ?
51 PsiBlast_CBE 89.7059% -99 - C8 -3V5O - ? -
2 PsiBlast_PDB 89.6459%-102 - C8 -1TWW - ? -
21 PsiBlast_CBE 89.6059%-103 - C8 -4NL1 - ? -
18 PsiBlast_PDB 89.5959%-101 - C8 -3TYB 3.3 ?
27 PsiBlast_CBE 89.5359% -92 - C8 -4NHV - ? -
39 PsiBlast_CBE 89.5259%-103 - C8 -3TYA 4.2 ?
20 PsiBlast_PDB 89.4059%-100 - C8 -3TYE 6.1 ?
35 PsiBlast_CBE 89.3459%-103 - C8 -4D8A 3.7 ?
48 PsiBlast_CBE 89.3259%-102 - C8 -1TWZ 3.8 ?
30 PsiBlast_CBE 89.2359%-102 - C8 -4DAI 3.3 ?
34 PsiBlast_CBE 89.1659%-100 - C8 -4D8Z 3.9 ?
14 PsiBlast_PDB 89.1659% -98 - C8 -3H2M 4.2 ?
4 PsiBlast_PDB 89.1159%-100 - C8 -1TX0 3.3 ?
29 PsiBlast_CBE 89.1059%-104 - C8 -4DAI 4.7 ?
44 PsiBlast_CBE 89.0059%-104 - C8 -3H2A 3.3 ?
32 PsiBlast_CBE 88.9459%-100 - C8 -4D9P 3.7 ?
41 PsiBlast_CBE 88.8859%-103 - C8 -3H2M 4.1 ?
31 PsiBlast_CBE 88.7759%-104 - C8 -4D9P 4.3 ?
8 PsiBlast_PDB 88.7259% -94 - C8 -3H23 4.1 ?
15 PsiBlast_PDB 88.6759%-104 - C8 -3H2N 4.0 ?
47 PsiBlast_CBE 88.4459%-102 - C8 -1TX0 4.4 ?
28 PsiBlast_CBE 88.4059%-102 - C8 -4DB7 3.8 ?
45 PsiBlast_CBE 88.2259%-104 - C8 -3H24 3.0 ?
7 PsiBlast_PDB 88.1959%-103 - C8 -3H22 4.6 ?
38 PsiBlast_CBE 88.1059%-102 - C8 -3TYB 5.8 ?
40 PsiBlast_CBE 88.0459%-103 - C8 -3H2N 3.2 ?
43 PsiBlast_CBE 87.7659%-105 - C8 -3H2C 3.4 ?
9 PsiBlast_PDB 87.7659% -98 - C8 -3H24 4.3 ?
10 PsiBlast_PDB 87.2559% -98 - C8 -3H26 3.7 ?
58 PsiBlast_CBE 86.6542%-102 - C8 -1AJ2 6.1 DHPS_ECOLI
59 PsiBlast_CBE 85.2342% -97 - C8 -1AJ0 3.5 DHPS_ECOLI
16 PsiBlast_PDB 84.6459%-100 - C8 -3H2O 4.7 ?
78 HHSearch 84.3941% -96 - C8 -1AJ0 3.6 DHPS_ECOLI
60 PsiBlast_CBE 81.1642% -92 - C8 -3TZF 6.2 ?
75 HHSearch 81.1041%-101 - C8 -1EYE 3.7 DHPS1_MYCTU
63 PsiBlast_CBE 80.9742% -95 - C8 -3TYZ 3.8 ?
66 PsiBlast_CBE 80.9440%-101 - C8 -1EYE 3.7 DHPS1_MYCTU
73 HHSearch 80.6037% -99 - C8 -2Y5S 5.5 ?
62 PsiBlast_CBE 80.0542% -95 - C8 -3TYZ 3.6 ?
61 PsiBlast_CBE 79.6242% -94 - C8 -3TZF 6.4 ?
79 HHSearch 78.9236% -86 - C8 -3TR9 5.8 ?
65 PsiBlast_CBE 77.0042%-109 - C8 -2DZB 4.0 ?
68 PsiBlast_CBE 75.3337% -94 - C8 -2Y5S 5.5 ?
74 HHSearch 74.8735% -89 - C8 -2BMB 4.2 FOL1_YEAST
67 PsiBlast_CBE 74.4737% -92 - C8 -2Y5S 6.0 ?
64 PsiBlast_CBE 74.2642% -92 - C8 -3TYU 5.9 ?
69 PsiBlast_CBE 72.4935%-101 - C8 -2VEG 4.5 DHPS_STRR6