@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0225: (2016-03-13 )
LDKIYLNELVFYGYHGVLKEETKLGQTFRVSLILGLSTKKAGISDSVEDTVSYADVYETVKEIVEGKPFKLIEALAEKIASEVLTGYPLLEEVTVKLIKPNPPIPGHYDSVAVEIERKRSDLNG

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NEU_C_7(2NM2)
FOLB_STAAU
[Raw transfer]




NEU_A_5(2NM2)
FOLB_STAAU
[Raw transfer]




MPU_A_3(2NM3)
FOLB_STAAU
[Raw transfer]




NEU_B_6(2NM2)
FOLB_STAAU
[Raw transfer]




204_I_9(1RRY)
FOLB_STAAU
[Raw transfer]




45P_A_2(1RS4)
FOLB_STAAU
[Raw transfer]




PH2_A_12(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_D_10(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_H_14(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_A_12(1NBU)
FOLB_MYCTU
[Raw transfer]




NPR_I_9(1U68)
FOLB_STAAU
[Raw transfer]




PH2_F_15(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_E_16(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_I_9(2DHN)
FOLB_STAAU
[Raw transfer]




NEU_D_8(2NM2)
FOLB_STAAU
[Raw transfer]




PH2_C_9(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_G_13(1NBU)
FOLB_MYCTU
[Raw transfer]




PH2_B_11(1NBU)
FOLB_MYCTU
[Raw transfer]




PSB_I_9(1RSD)
FOLB_STAAU
[Raw transfer]




9MG_I_9(1RRW)
FOLB_STAAU
[Raw transfer]




209_I_9(1RS2)
FOLB_STAAU
[Raw transfer]




977_A_2(1RSI)
FOLB_STAAU
[Raw transfer]




8 PsiBlast_PDB 93.9647%-134 - C8 -1U68 2.7 FOLB_STAAU
49 HHSearch 93.4947%-128 * C8 *1DHN - FOLB_STAAU -
37 PsiBlast_CBE 93.1547%-129 - C8 -1SQL - FOLB1_ARATH -
4 PsiBlast_PDB 93.1447%-132 - C8 -1RS2 3.0 FOLB_STAAU
2 PsiBlast_PDB 93.1247%-134 - C8 -1RRW 2.9 FOLB_STAAU
24 PsiBlast_CBE 92.9847%-126 - C8 -1SQL - FOLB1_ARATH -
22 PsiBlast_CBE 92.9647%-134 - C8 -2NM2 2.6 FOLB_STAAU
31 PsiBlast_CBE 92.8947%-129 - C8 -1SQL - FOLB1_ARATH -
5 PsiBlast_PDB 92.7447%-133 - C8 -1RS4 3.8 FOLB_STAAU
30 PsiBlast_CBE 92.6447%-129 - C8 -1SQL - FOLB1_ARATH -
6 PsiBlast_PDB 92.6147%-130 - C8 -1RSD 4.1 FOLB_STAAU
1 PsiBlast_PDB 92.5947%-127 - C8 -1RRI - FOLB_STAAU -
9 PsiBlast_PDB 92.5247%-134 - C8 -1DHN - FOLB_STAAU -
32 PsiBlast_CBE 92.5047%-131 - C8 -1SQL - FOLB1_ARATH -
38 PsiBlast_CBE 92.4947%-131 - C8 -1SQL - FOLB1_ARATH -
52 HHSearch 92.4347%-131 - C8 -1SQL - FOLB1_ARATH -
13 PsiBlast_PDB 92.3047%-134 - C8 -1SQL - FOLB1_ARATH -
33 PsiBlast_CBE 92.2447%-129 - C8 -1SQL - FOLB1_ARATH -
3 PsiBlast_PDB 92.1847%-133 - C8 -1RRY 2.9 FOLB_STAAU
7 PsiBlast_PDB 92.1047%-131 - C8 -1RSI 5.3 FOLB_STAAU
10 PsiBlast_PDB 91.5847%-132 - C8 -2DHN 3.6 FOLB_STAAU
21 PsiBlast_CBE 91.5047%-134 - C8 -2NM2 3.8 FOLB_STAAU
12 PsiBlast_PDB 90.4447%-129 - C8 -2NM3 3.3 FOLB_STAAU
23 PsiBlast_CBE 89.9747%-130 - C8 -2NM2 5.4 FOLB_STAAU
11 PsiBlast_PDB 89.6447%-128 - C8 -2NM2 2.9 FOLB_STAAU
54 HHSearch 83.1937%-118 - C8 -1NBU 3.7 FOLB_MYCTU
44 PsiBlast_CBE 83.0937%-121 - C8 -1NBU 3.6 FOLB_MYCTU
43 PsiBlast_CBE 82.8737%-118 - C8 -1NBU 3.7 FOLB_MYCTU
39 PsiBlast_CBE 82.0037%-124 - C8 -1NBU 3.4 FOLB_MYCTU
41 PsiBlast_CBE 81.4837%-124 - C8 -1NBU 3.4 FOLB_MYCTU
14 PsiBlast_PDB 81.4237%-113 - C8 -1NBU 3.6 FOLB_MYCTU
45 PsiBlast_CBE 81.0337%-114 - C8 -1NBU 4.1 FOLB_MYCTU
40 PsiBlast_CBE 80.8637%-122 - C8 -1NBU 4.1 FOLB_MYCTU
42 PsiBlast_CBE 80.7737%-124 - C8 -1NBU 3.3 FOLB_MYCTU