@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0348: (2016-03-14 )
MRRLVNDGYEAVEEMLAGYVAAQGKYVDFAENDKRVIVSKQMSEEPRVRIIVGGGSGHEPLFLGYVGKDFADAAVVGNINTSPSPEPCYNAVKAVDSGKGCLYMYGNYAGDVMNFDMGAEMAADDGIRVETVLVTDDIYSAEKVEDRRGVAGDLIVFKAAASAAAKGLDLDAVKQAAEKANANTFSMGVALSSSTLPVTGKAIFEMKEGEMEVGMGIHGEPGIKRTSIEPADKVVDQIMGYLIEEMKLTSDEEVHVLINGLGGLPVMDQYICYRRVDEILKEKGVHIHNPLVGNYATSMDMIGMSITLVRLDDELKDLLDTPCDTPYFKVD

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3H_B_6(1UOD)
DHAK_ECOLI
[Raw transfer]



G3H_A_5(1UOD)
DHAK_ECOLI
[Raw transfer]



GOL_A_3(2IU6)
DHAQ_LACLA
[Raw transfer]



GOL_B_4(2IU6)
DHAQ_LACLA
[Raw transfer]



GOL_B_6(4LRX)
DHAK_ECOLI
[Raw transfer]



GOL_A_5(4LRY)
DHAK_ECOLI
[Raw transfer]



GOL_A_3(3PNK)
DHAK_ECOLI
[Raw transfer]



GOL_A_5(4LRX)
DHAK_ECOLI
[Raw transfer]



GOL_B_6(4LRY)
DHAK_ECOLI
[Raw transfer]



2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]



2HA_C_6(3CT4)
DHAK_LACLA
[Raw transfer]



2HA_B_5(3CT4)
DHAK_LACLA
[Raw transfer]



2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]



GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]



GOL_B_4(3PNK)
DHAK_ECOLI
[Raw transfer]



GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]



GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]



GOL_B_6(1OI2)
DHAK_ECOLI
[Raw transfer]



GOL_B_5(1UOE)
DHAK_ECOLI
[Raw transfer]



GOL_A_3(1UOE)
DHAK_ECOLI
[Raw transfer]



2HA_A_6(1UN9)
DHAK_CITFR
[Raw transfer]



2HA_B_10(1UN9)
DHAK_CITFR
[Raw transfer]



ADP_B_4(3PNL)
DHAK_ECOLI
[Raw transfer]
35 HHSearch 99.3137% -95 - C5 -1OI2 2.3 DHAK_ECOLI
50 Fugue 99.0436% -93 * C5 *1OI2 2.3 DHAK_ECOLI
6 PsiBlast_PDB 96.8134% -94 - C5 -1UOE 2.6 DHAK_ECOLI
3 PsiBlast_PDB 96.7234% -93 - C5 -1OI2 2.3 DHAK_ECOLI
5 PsiBlast_PDB 96.6834% -92 - C5 -1UOD 3.1 DHAK_ECOLI
4 PsiBlast_PDB 96.4934% -94 - C5 -1OI3 - DHAK_ECOLI -
25 PsiBlast_CBE 96.4034% -95 - C5 -1OI2 2.5 DHAK_ECOLI
10 PsiBlast_PDB 96.3834% -98 - C5 -3PNO - DHAK_ECOLI -
12 PsiBlast_PDB 96.3134% -97 - C5 -3PNM - DHAK_ECOLI -
24 PsiBlast_CBE 96.0834% -96 - C5 -1OI3 - DHAK_ECOLI -
23 PsiBlast_CBE 96.0334% -94 - C5 -1UOD 3.1 DHAK_ECOLI
26 PsiBlast_CBE 96.0134% -94 - C5 -1UOE 2.5 DHAK_ECOLI
8 PsiBlast_PDB 95.9434% -92 - C5 -3PNL 2.9 DHAK_ECOLI
29 PsiBlast_CBE 95.8234% -97 - C5 -3PNQ - DHAK_ECOLI -
34 HHSearch 95.6938% -96 - C5 -3CT4 2.7 DHAK_LACLA
11 PsiBlast_PDB 95.6434% -99 - C5 -3PNQ - DHAK_ECOLI -
2 PsiBlast_PDB 95.4034% -92 - C5 -4LRX 3.4 DHAK_ECOLI
7 PsiBlast_PDB 95.3834% -96 - C5 -3PNK 2.8 DHAK_ECOLI
27 PsiBlast_CBE 95.1934% -96 - C5 -3PNK 2.4 DHAK_ECOLI
9 PsiBlast_PDB 95.1434% -93 - C5 -4LRY 3.1 DHAK_ECOLI
22 PsiBlast_CBE 95.0834% -93 - C5 -4LRX 3.0 DHAK_ECOLI
20 PsiBlast_CBE 94.8438% -90 - C5 -3CT4 2.5 DHAK_LACLA
28 PsiBlast_CBE 94.8334% -92 - C5 -4LRY 3.3 DHAK_ECOLI
21 PsiBlast_CBE 94.7838% -89 - C5 -3CT4 2.5 DHAK_LACLA
1 PsiBlast_PDB 94.6838% -90 - C5 -3CT4 2.7 DHAK_LACLA
15 PsiBlast_PDB 90.4832% -95 - C5 -2IU6 2.7 DHAQ_LACLA
32 PsiBlast_CBE 89.3532% -93 - C5 -2IU6 3.0 DHAQ_LACLA
14 PsiBlast_PDB 87.7236% -89 - C5 -1UN9 2.2 DHAK_CITFR
31 PsiBlast_CBE 87.7136% -89 - C5 -1UN9 2.0 DHAK_CITFR