@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0406: (2016-03-15 )
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_2(3E5D)
?
[Raw transfer]




1 PsiBlast_PDB 95.5796%-112 - C2 -3E5D 3.2 ?
24 HHSearch 60.6225% -81 - C2 -1F9Z - LGUL_ECOLI -
31 HHSearch 60.4422% -92 - C2 -2KJZ - ? -
5 PsiBlast_PDB 59.6425%-102 - C2 -1XQA - ? -
10 PsiBlast_PDB 59.4125% -82 - C2 -3KOL - ? -
28 HHSearch 58.4925%-103 - C2 -1XQA - ? -
35 HHSearch 55.5021% -87 - C2 -3KOL - ? -
43 Fugue 54.9520% -79 * C2 *1ZSW - ? -
23 HHSearch 53.9020% -86 - C2 -3L7T - ? -
34 HHSearch 53.8023% -80 - C2 -3RRI - ? -
33 HHSearch 52.1219% -88 - C2 -3EY7 - ? -
9 PsiBlast_PDB 51.8724% -64 - C2 -3HUH - VIR17_SALTY -
3 PsiBlast_PDB 51.5628% -66 - C2 -2P25 - ? -
22 HHSearch 51.0122% -84 - C2 -2P7O - FOSX_LISMO -
36 HHSearch 50.1019% -79 - C2 -3RMU - MCEE_HUMAN -
40 HHSearch 49.9415% -66 - C2 -1TWU - YYCE_BACSU -
46 Fugue 49.8124% -58 - C2 -3CT8 - ? -
41 HHSearch 49.7019% -90 - C2 -3G12 - ? -
39 HHSearch 49.5919% -76 - C2 -3SK2 - EHPR_ENTAG -
25 HHSearch 48.7018% -73 - C2 -2A4X - ? -