@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0476: (2016-03-15 )
MKMTDPLYGTFEIEPVLAELIQSPLVSRLAHVHQGGSSYLVNPLWDLSRLDHSIGVMLFIRKFGGSLEEQIAGLLHDVSHTAFSHVVDYALDFEEEDYHEQIFEDFVKTSTIPAILEKYGYSFEGIFNDISKWKILEQEAPELCADRIDYTLQDLYRHGKISLAEVKEFLQALVMVDGRLYLANIALAEWFVAQYYSEVIDYFYDPLNVYSYEILAEAMRIAFQQETITTADLRLTDAELLAKLNANSDAREKIQLLASPHLEENEVDFTYHHKKKMRLINPSVLVDGRLIPADELSEKVREMNDWASERSKHGIYIKATKKSKQ

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TTP_A_4(4RXS)
SAMH1_HUMAN
[Raw transfer]



TTP_B_9(4RXS)
SAMH1_HUMAN
[Raw transfer]



DTP_A_3(4RXP)
SAMH1_HUMAN
[Raw transfer]



DCP_A_3(4RXR)
SAMH1_HUMAN
[Raw transfer]



DCP_B_9(4RXR)
SAMH1_HUMAN
[Raw transfer]



DTP_B_9(4RXP)
SAMH1_HUMAN
[Raw transfer]



GOL_A_20(2HEK)
?
[Raw transfer]



DGT_B_11(4MZ7)
SAMH1_HUMAN
[Raw transfer]



DGT_A_4(4MZ7)
SAMH1_HUMAN
[Raw transfer]



DUT_A_4(4RXQ)
SAMH1_HUMAN
[Raw transfer]



DUT_B_9(4RXQ)
SAMH1_HUMAN
[Raw transfer]
64 Fugue 96.2026% -89 - C9 -2HEK - ? -
38 HHSearch 94.3927% -87 - C9 -2HEK - ? -
1 PsiBlast_PDB 92.2928%-102 - C8 -2HEK 2.3 ?
39 HHSearch 82.3421% -76 * C9 *2Q14 - ? -
32 PsiBlast_CBE 69.0531% -93 - C8 -4RXO - SAMH1_HUMAN -
2 PsiBlast_PDB 68.7331% -92 - C8 -4BZC - SAMH1_HUMAN -
23 PsiBlast_CBE 68.5731% -94 - C8 -4BZC - SAMH1_HUMAN -
33 PsiBlast_CBE 68.5231% -92 - C8 -4RXO - SAMH1_HUMAN -
4 PsiBlast_PDB 68.4131% -97 - C8 -4MZ7 4.4 SAMH1_HUMAN
25 PsiBlast_CBE 68.3331% -96 - C8 -4Q7H - SAMH1_HUMAN -
31 PsiBlast_CBE 68.2231% -93 - C8 -4RXO - SAMH1_HUMAN -
26 PsiBlast_CBE 68.2131% -94 - C8 -4Q7H - SAMH1_HUMAN -
27 PsiBlast_CBE 68.1831% -97 - C8 -4RXS 4.1 SAMH1_HUMAN
13 PsiBlast_PDB 67.8830% -95 - C8 -4TNQ - SAMH1_HUMAN -
15 PsiBlast_PDB 67.8730% -90 - C8 -4TNX - SAMH1_HUMAN -
22 PsiBlast_CBE 67.8631% -91 - C8 -4BZC - SAMH1_HUMAN -
21 PsiBlast_CBE 67.8431% -93 - C8 -4BZC - SAMH1_HUMAN -
5 PsiBlast_PDB 67.8231% -91 - C8 -4RXO - SAMH1_HUMAN -
6 PsiBlast_PDB 67.5231% -99 - C8 -4RXP 4.4 SAMH1_HUMAN
34 PsiBlast_CBE 67.4731% -97 - C8 -4MZ7 4.1 SAMH1_HUMAN
9 PsiBlast_PDB 67.3631% -97 - C8 -4RXS 4.1 SAMH1_HUMAN
29 PsiBlast_CBE 67.3131%-100 - C8 -4RXQ 3.6 SAMH1_HUMAN
30 PsiBlast_CBE 67.2031% -98 - C8 -4RXP 3.4 SAMH1_HUMAN
28 PsiBlast_CBE 67.1831%-100 - C8 -4RXR 3.9 SAMH1_HUMAN
7 PsiBlast_PDB 67.1431%-100 - C8 -4RXQ 3.7 SAMH1_HUMAN
8 PsiBlast_PDB 66.8831% -99 - C8 -4RXR 3.5 SAMH1_HUMAN