@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0563: (2016-03-16 )
LLTKRIIPCLDVTAGRVVKGVNFVSLTDVGDPVEIAKAYNEAGADELVFLDITATVELRQTMIDVVERTAEQVFIPLTVGGGISSVSDMKELLQAGADKISLNSAAIKRPELIQEGAAKFGNQCIVVAIDAKWNGTNWSVFTRGGRNDTGLDAIEWAKKAVQLGAGEILLTSMDGDGTKNGYDIPLTKAISEAVSVPVIASGGCGNAAHMVEVFEKTKATAALAASIFHYGELSIKNVKTTLLEKGVNIRP

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0VR_D_2(4EWN)
HIS6_THEMA
[Raw transfer]



GOL_A_6(1H5Y)
HIS6_PYRAE
[Raw transfer]



GOL_B_9(1H5Y)
HIS6_PYRAE
[Raw transfer]



GOL_B_10(1H5Y)
HIS6_PYRAE
[Raw transfer]



POP_A_9(1OX4)
HIS5_YEAST
[Raw transfer]



1PR_A_5(1OX5)
HIS5_YEAST
[Raw transfer]



1PR_B_4(1OX5)
HIS5_YEAST
[Raw transfer]



POP_B_10(1OX4)
HIS5_YEAST
[Raw transfer]
21 PsiBlast_CBE 97.1769%-107 - C3 -4EVZ - ? -
1 PsiBlast_PDB 94.0463%-100 - C3 -1KA9 - HIS6_THET8 -
58 HHSearch 92.5352%-102 - C3 -1THF - HIS6_THEMA -
77 Fugue 92.4852%-102 - C3 -1THF - HIS6_THEMA -
5 PsiBlast_PDB 91.2451% -96 - C3 -2A0N - HIS6_THEMA -
6 PsiBlast_PDB 91.1351% -98 - C3 -1THF - HIS6_THEMA -
25 PsiBlast_CBE 90.7151% -98 - C3 -2WJZ - HIS6_THEMA -
3 PsiBlast_PDB 90.6252% -96 - C3 -1VH7 - HIS6_THEMA -
4 PsiBlast_PDB 90.5951% -98 - C3 -2WJZ - HIS6_THEMA -
2 PsiBlast_PDB 89.9254% -98 - C3 -1H5Y 2.9 HIS6_PYRAE
27 PsiBlast_CBE 89.8551% -96 - C3 -1GPW - HIS6_THEMA -
22 PsiBlast_CBE 89.8554% -97 - C3 -1H5Y 3.1 HIS6_PYRAE
7 PsiBlast_PDB 89.6751% -94 - C3 -1GPW - HIS6_THEMA -
24 PsiBlast_CBE 88.9551% -98 - C3 -3ZR4 - HIS6_THEMA -
8 PsiBlast_PDB 88.9550%-102 - C3 -4EWN 4.6 HIS6_THEMA
9 PsiBlast_PDB 88.4446% -96 - C3 -2RKX - ? -
23 PsiBlast_CBE 88.3751%-100 - C3 -3ZR4 - HIS6_THEMA -
26 PsiBlast_CBE 88.0951% -98 - C3 -1GPW - HIS6_THEMA -
10 PsiBlast_PDB 87.9446% -98 - C3 -3IIO - ? -
12 PsiBlast_PDB 87.0545%-101 - C3 -3IIV - ? -
34 PsiBlast_CBE 77.2434%-113 - C3 -1OX4 3.0 HIS5_YEAST
32 PsiBlast_CBE 51.2134% -17 - C3 -1OX5 2.2 HIS5_YEAST
15 PsiBlast_PDB 50.1334% -14 - C3 -1OX5 2.7 HIS5_YEAST
14 PsiBlast_PDB 49.8234% -13 - C3 -1OX4 3.2 HIS5_YEAST