@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0568: (2016-03-16 )
MKALKIALTKGRLEKDAVALLEKAGIDCSSMTDKKRKLIFHSSTQPISFILVKAVDVMTYVKHGVADIGIVGKDVLMEASKSHYEMLDLEIGKCQFCLASTPDFDPSSYRRKIIATKYPTVASKFFREKGEDVEIIKIEGSVEIAPVLDLADAIIDIVETGSTLKENGLIIYEKMYPISARLIVNKASLKQNKTQIFHLIDQLEQAIKEELAE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PRT_G_7(1Q1K)
HIS1_ECOLI
[Raw transfer]



AMP_A_7(1H3D)
HIS1_ECOLI
[Raw transfer]



AMP_A_7(1H3D)
HIS1_ECOLI
[Raw transfer]
23 PsiBlast_CBE 96.8549%-141 - C1 -1Z7N - HIS1_LACLA -
22 PsiBlast_CBE 95.9649%-147 - C1 -1Z7N - HIS1_LACLA -
2 PsiBlast_PDB 94.3649%-139 - C1 -1Z7N - HIS1_LACLA -
21 PsiBlast_CBE 94.0749%-142 - C1 -1Z7N - HIS1_LACLA -
26 PsiBlast_CBE 93.3149%-134 - C1 -1Z7M - HIS1_LACLA -
25 PsiBlast_CBE 92.8449%-141 - C1 -1Z7M - HIS1_LACLA -
32 HHSearch 92.5947%-117 - C1 -2VD2 - HIS1_BACSU -
1 PsiBlast_PDB 92.0846%-115 - C1 -2VD2 - HIS1_BACSU -
24 PsiBlast_CBE 89.7849%-136 - C1 -1Z7M - HIS1_LACLA -
36 HHSearch 86.4834%-121 - C1 -1H3D 6.2 HIS1_ECOLI
37 HHSearch 85.3232%-132 - C1 -2VD3 - HIS1_METTH -
9 PsiBlast_PDB 85.1536%-133 - C1 -1Q1K 6.1 HIS1_ECOLI
8 PsiBlast_PDB 84.8436%-129 - C1 -1H3D 6.2 HIS1_ECOLI
34 HHSearch 84.3734%-145 - C1 -1VE4 - HIS1_THET2 -
3 PsiBlast_PDB 84.1034%-142 - C1 -1VE4 - HIS1_THET2 -
31 PsiBlast_CBE 81.5633%-129 - C1 -2VD3 - HIS1_METTH -
7 PsiBlast_PDB 81.5333%-132 - C1 -2VD3 - HIS1_METTH -
4 PsiBlast_PDB 81.1134%-108 - C1 -1O64 - HIS1_THEMA -
29 PsiBlast_CBE 80.1334%-125 - C- -1USY - HIS1_THEMA -
27 PsiBlast_CBE 78.9434%-110 - C1 -1O64 - HIS1_THEMA -