@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0574: (2016-03-16 )
MTYKFPENFWWGSAASGPQTEGAADVDGRKPSIWDHWYKIEPGRFFNDVGPTNTSNFYYQYKEDIALMKQTGHNSFRTSIQWSRLIPDGIGEVNPKAVDFYNRVIDEMLANDVEPFMNLYHFDMPMSMQEKGGFESREVVDAYATFAKTCFELFGDRVKHWFTFNEPIVPVEAGYLYDMHYPNVVDFKRATQVAYHTTLAHALAVKEFHALEIPEGQIGIILNLTPSYPRSQNPADLKAAHIADLIFNRSFLDPVTKGEFPTDLVEIIREHDALPEYTEEDLAIIKNNIIDILGVNYYQPRRVKAKEYAAHPDAPFMPEHLFDNYEMPYRKMNPYRGWEIFERAIYDIAINLRDNYDNIPFFISENGMGVEGESRYRNADGMIEDTYRIDFIKSHLKWLHKAIEEGANCHGYHLWTFMDCWSWANAYKNRYGLVEVDLDNDFKRTVKASGHWYKELAENNGFED

Atome Classification :

(65 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BGC_A_2(4HZ8)
?
[Raw transfer]



GOX_B_9(2J78)
BGLA_THEMA
[Raw transfer]



GIM_B_7(2CES)
BGLA_THEMA
[Raw transfer]



GOX_A_7(2J78)
BGLA_THEMA
[Raw transfer]



NTZ_B_5(2J7B)
BGLA_THEMA
[Raw transfer]



GIM_A_4(2CES)
BGLA_THEMA
[Raw transfer]



TCB_A_3(4PTV)
?
[Raw transfer]



BGC_A_2(4HZ7)
?
[Raw transfer]



NOY_B_6(2J75)
BGLA_THEMA
[Raw transfer]



GIM_A_8(4RE3)
?
[Raw transfer]



IFL_B_4(1UZ1)
BGLA_THEMA
[Raw transfer]



GTL_A_3(2J79)
BGLA_THEMA
[Raw transfer]



NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]



GTL_B_5(2J79)
BGLA_THEMA
[Raw transfer]



GLC_A_2(2O9T)
BGLB_PAEPO
[Raw transfer]



NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]



IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]



TCB_B_6(4PTV)
?
[Raw transfer]



NOJ_B_5(2J77)
BGLA_THEMA
[Raw transfer]



CGB_B_5(2CBV)
BGLA_THEMA
[Raw transfer]



MVL_A_2(4RE2)
?
[Raw transfer]



CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]



CTS_A_3(2CBU)
BGLA_THEMA
[Raw transfer]



BGC_B_5(4PTX)
?
[Raw transfer]



BMA_A_9(4JIE)
?
[Raw transfer]



BGC_A_3(4PTX)
?
[Raw transfer]



CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]



SRT_A_24(3CMJ)
?
[Raw transfer]



OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]



NOJ_B_4(1OIM)
BGLA_THEMA
[Raw transfer]



GOL_S_19(2DGA)
HGL1B_WHEAT
[Raw transfer]



OXZ_B_4(1W3J)
BGLA_THEMA
[Raw transfer]



AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]



IFM_A_3(1OIF)
BGLA_THEMA
[Raw transfer]



GOL_S_19(2DGA)
HGL1B_WHEAT
[Raw transfer]



GOL_A_6(4JHO)
?
[Raw transfer]



YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]



GOL_A_3(3WH5)
?
[Raw transfer]



FCB_A_2(3WH7)
?
[Raw transfer]



IFM_B_4(1OIF)
BGLA_THEMA
[Raw transfer]



IFM_A_3(3WH8)
?
[Raw transfer]



NCW_B_7(2VRJ)
BGLA_THEMA
[Raw transfer]



GOL_A_2(4HZ6)
?
[Raw transfer]



G2F_A_2(2JIE)
BGLB_PAEPO
[Raw transfer]



G2F_A_3(4PTW)
?
[Raw transfer]



IFM_A_2(4RE4)
?
[Raw transfer]



G2F_B_5(4PTW)
?
[Raw transfer]



G2F_A_3(1OIN)
BGLA_THEMA
[Raw transfer]



TRS_A_2(3W53)
?
[Raw transfer]



G2F_A_9(1UYQ)
BGLA_PAEPO
[Raw transfer]



TRS_A_2(3W53)
?
[Raw transfer]



G2F_B_4(1OIN)
BGLA_THEMA
[Raw transfer]



EDO_A_6(2J78)
BGLA_THEMA
[Raw transfer]
2 PsiBlast_PDB 96.6550% -82 - C4 -4B3L - ? -
1 PsiBlast_PDB 96.6150% -85 - C4 -4B3K - ? -
26 PsiBlast_CBE 87.5638% -82 - C4 -3AHX - ? -
101 Fugue 87.4535% -84 - C4 -1QOX - BGLA_BACCI -
7 PsiBlast_PDB 87.1438% -81 - C4 -3AHX - ? -
22 PsiBlast_CBE 86.8837% -79 - C4 -4PTW 2.8 ?
27 PsiBlast_CBE 86.8038% -82 - C4 -3AHX - ? -
21 PsiBlast_CBE 86.6437% -78 - C4 -4PTX 3.5 ?
25 PsiBlast_CBE 86.4938% -80 - C4 -3AHX - ? -
23 PsiBlast_CBE 86.3937% -81 - C4 -4PTV 4.0 ?
3 PsiBlast_PDB 86.0737% -78 - C4 -4PTV 4.0 ?
5 PsiBlast_PDB 85.9237% -79 - C4 -4PTX 3.5 ?
128 HHSearch 85.8038% -77 * C4 *2J78 2.7 BGLA_THEMA
64 PsiBlast_CBE 85.6434% -78 - C4 -3CMJ 3.3 ?
71 PsiBlast_CBE 85.5234% -80 - C4 -1TR1 - BGLA_PAEPO -
126 HHSearch 85.4833% -79 - C4 -1GNX - ? -
72 PsiBlast_CBE 85.4434% -80 - C4 -1TR1 - BGLA_PAEPO -
98 PsiBlast_CBE 85.4235% -79 - C4 -4RE3 3.0 ?
6 PsiBlast_PDB 85.2437% -78 - C4 -3TA9 - ? -
73 PsiBlast_CBE 85.2034% -79 - C4 -1TR1 - BGLA_PAEPO -
96 PsiBlast_CBE 85.1235% -78 - C4 -4JHO 3.1 ?
14 PsiBlast_PDB 85.1237% -76 - C4 -2CBV 4.0 BGLA_THEMA
74 PsiBlast_CBE 85.0934% -80 - C4 -1UYQ 2.3 BGLA_PAEPO
4 PsiBlast_PDB 84.9137% -76 - C4 -4PTW 2.6 ?
95 PsiBlast_CBE 84.9035% -77 - C4 -4JIE 3.1 ?
99 PsiBlast_CBE 84.8135% -76 - C4 -4RE2 2.7 ?
9 PsiBlast_PDB 84.7637% -78 - C4 -1OIM 4.0 BGLA_THEMA
42 PsiBlast_CBE 84.6737% -77 - C4 -2J7H 3.6 BGLA_THEMA
54 PsiBlast_CBE 84.6537% -76 - C4 -2CBV 4.2 BGLA_THEMA
58 PsiBlast_CBE 84.6437% -78 - C4 -1OIN 3.9 BGLA_THEMA
97 PsiBlast_CBE 84.6035% -79 - C4 -4RE4 3.7 ?
11 PsiBlast_PDB 84.6037% -73 - C4 -1W3J 3.7 BGLA_THEMA
63 PsiBlast_CBE 84.5934% -77 - C4 -4HZ6 2.1 ?
51 PsiBlast_CBE 84.5237% -76 - C4 -2J75 4.1 BGLA_THEMA
118 HHSearch 84.3635% -76 - C4 -3W53 3.0 ?
62 PsiBlast_CBE 84.3534% -77 - C4 -4HZ7 3.7 ?
61 PsiBlast_CBE 84.2934% -79 - C4 -4HZ8 3.8 ?
59 PsiBlast_CBE 84.1137% -76 - C4 -1OIM 4.1 BGLA_THEMA
8 PsiBlast_PDB 84.1137% -75 - C4 -1OIF 3.6 BGLA_THEMA
19 PsiBlast_PDB 84.0337% -75 - C4 -2J75 4.3 BGLA_THEMA
16 PsiBlast_PDB 83.9937% -76 - C4 -2J78 4.3 BGLA_THEMA
60 PsiBlast_CBE 83.7637% -76 - C4 -1OIF 3.5 BGLA_THEMA
12 PsiBlast_PDB 83.7537% -76 - C4 -1UZ1 3.8 BGLA_THEMA
15 PsiBlast_PDB 83.6837% -75 - C4 -2CES 4.5 BGLA_THEMA
57 PsiBlast_CBE 83.6337% -75 - C4 -1UZ1 3.8 BGLA_THEMA
41 PsiBlast_CBE 83.5737% -77 - C4 -2JAL 3.5 BGLA_THEMA
17 PsiBlast_PDB 83.5737% -76 - C4 -2J79 3.8 BGLA_THEMA
10 PsiBlast_PDB 83.5037% -75 - C4 -1OIN 2.8 BGLA_THEMA
78 PsiBlast_CBE 83.4534% -76 - C4 -3W53 3.0 ?
48 PsiBlast_CBE 83.3537% -77 - C4 -2J79 3.8 BGLA_THEMA
13 PsiBlast_PDB 83.3437% -77 - C4 -2CBU 4.7 BGLA_THEMA
66 PsiBlast_CBE 83.2634% -75 - C4 -3WH7 3.3 ?
55 PsiBlast_CBE 83.1737% -76 - C4 -2CBU 4.6 BGLA_THEMA
49 PsiBlast_CBE 82.9137% -76 - C4 -2J78 4.3 BGLA_THEMA
56 PsiBlast_CBE 82.6537% -77 - C4 -1W3J 3.4 BGLA_THEMA
53 PsiBlast_CBE 82.6537% -76 - C4 -2CES 4.2 BGLA_THEMA
111 HHSearch 82.6431% -70 - C4 -2DGA 2.9 HGL1B_WHEAT
92 PsiBlast_CBE 82.6331% -76 - C4 -2DGA 2.9 HGL1B_WHEAT
47 PsiBlast_CBE 82.5637% -76 - C4 -2J7B 4.2 BGLA_THEMA
50 PsiBlast_CBE 82.1937% -77 - C4 -2J77 4.0 BGLA_THEMA
85 PsiBlast_CBE 82.1433% -76 - C4 -2JIE 2.1 BGLB_PAEPO
68 PsiBlast_CBE 82.1334% -75 - C4 -3WH5 2.6 ?
65 PsiBlast_CBE 82.1034% -74 - C4 -3WH8 3.5 ?
40 PsiBlast_CBE 82.0437% -74 - C4 -2VRJ 5.0 BGLA_THEMA
83 PsiBlast_CBE 81.9833% -78 - C4 -2O9T 3.8 BGLB_PAEPO