@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0602: (2016-03-17 )
MDFHIRKATNSDAEAIQHVAITSWHHTYQDLIPGDVQDDFLERFYNVETLHNRISATPFAVVEQADKVIGFANFIELEKGKSELAAFYLLPEVTQRGLGTELLEVGMTLFHVPLPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLETIRFNLNHHAFEEE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_7(3FNC)
?
[Raw transfer]




EDO_B_14(3FNC)
?
[Raw transfer]




EDO_A_9(3FNC)
?
[Raw transfer]




21 PsiBlast_CBE 98.8996%-137 - C1 -3FNC 2.3 ?
31 HHSearch 98.2297%-134 - C1 -3FNC 2.3 ?
1 PsiBlast_PDB 98.0796%-132 - C1 -3FNC 3.4 ?
2 PsiBlast_PDB 70.4827%-113 - C1 -1WK4 - ? -
33 HHSearch 69.9927%-106 - C1 -2CY2 - ? -
3 PsiBlast_PDB 69.3127%-112 - C1 -2CY2 - ? -
47 HHSearch 67.6420%-101 - C1 -1YR0 - ? -
42 HHSearch 65.5022%-120 - C1 -2KCW - YJAB_ECOLI -
32 HHSearch 64.5420%-110 - C1 -1TIQ - PAIA_BACSU -
5 PsiBlast_PDB 63.7628%-100 - C1 -3K9U - PAIA_THEAC -
51 Fugue 63.4625%-101 - C1 -2CY2 - ? -
34 HHSearch 62.4416% -87 - C1 -2FIW - ? -
4 PsiBlast_PDB 62.2423%-117 - C1 -1TIQ - PAIA_BACSU -
7 PsiBlast_PDB 62.0529%-101 - C1 -3F0A - PAIA_THEAC -
37 HHSearch 61.2720% -87 * C1 *3DR6 - MDDA_SALTY -
53 Fugue 60.9721% -87 - C1 -2KCW - YJAB_ECOLI -
46 HHSearch 60.9318% -91 - C1 -1GHE - TTR_PSEAJ -
40 HHSearch 60.7021% -89 - C1 -3WR7 - ? -
6 PsiBlast_PDB 60.4929% -97 - C1 -3NE7 - PAIA_THEAC -
39 HHSearch 60.4819% -90 - C1 -3LD2 - ? -