Study : Lmo0664 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: COA_B_8(3V4E) / Model_31(3V4E/C) = [3.2] Download1639.4422.50MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
Complex: GOL_A_6(3SRT) / Model_133(3SRT/A) = [3.3] Download330.3723.36MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
Complex: COA_B_9(3V4E) / Model_32(3V4E/B) = [3.3] Download1845.6922.50MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
Complex: GOL_A_6(3SRT) / Model_6(3SRT/A) = [3.3] Download540.6123.36MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
Complex: GOL_F_14(4EGG) / Model_33(4EGG/F) = [3.7] Download504.8020.38MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
Consensus
[pKd Mean = 3.36]
-972
(s=636)
22
(s=1)
MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK